Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_708834 752 aa linear CON 24-AUG-2016 ACCESSION NP_708834 VERSION NP_708834.1 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 752) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 752) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 752) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 752) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 752) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN44541. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..752 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..752 /product="DNA topoisomerase IV subunit A" /calculated_mol_wt=83701 Region 5..738 /region_name="parC_Gneg" /note="DNA topoisomerase IV, A subunit, proteobacterial; TIGR01062" /db_xref="CDD:130134" Region 499..538 /region_name="GyrA_CTD repeat" /note="GyrA_CTD repeat [structural motif]" /db_xref="CDD:293790" Region 541..587 /region_name="GyrA_CTD repeat" /note="GyrA_CTD repeat [structural motif]" /db_xref="CDD:293790" Region 592..636 /region_name="GyrA_CTD repeat" /note="GyrA_CTD repeat [structural motif]" /db_xref="CDD:293790" Region 640..693 /region_name="GyrA_CTD repeat" /note="GyrA_CTD repeat [structural motif]" /db_xref="CDD:293790" CDS 1..752 /gene="parC" /locus_tag="SF3063" /coded_by="complement(NC_004337.2:3159155..3161413)" /note="Code: L; COG: COG0188" /transl_table=11 /db_xref="GeneID:1026670" CONTIG join(WP_001281881.1:1..752) ORIGIN 1 msdmaerlal heftenayln ysmyvimdra lpfigdglkp vqrrivyams elglnasakf 61 kksartvgdv lgkyhphgds acyeamvlma qpfsyryplv dgqgnwgapd dpksfaamry 121 tesrlskyse lllselgqgt adwvpnfdgt lqepkmlpar lpnillngtt giavgmatdi 181 pphnlrevaq aaialidqpk ttldqlldiv qgpdypteae iitsraeirk iyengrgsvr 241 mravwkkedg avvisalphq vsgarvleqi aaqmrnkklp mvddlrdesd henptrlviv 301 prsnrvdmdq vmnhlfattd leksyrinln migldgrpav knlleilsew lvfrrdtvrr 361 rlnyrlekvl krlhilegll vaflnidevi eiirnedepk palmsrfglt etqaeailel 421 klrhlaklee mkirgeqsel ekerdqlqgi laserkmnnl lkkelqadaq aygddrrspl 481 qereeakams ehdmlpsepv tivlsqmgwv rsakghdida pglnykagds fkaavkgksn 541 qpvvfvdstg rsyaidpitl psargqgepl tgkltlppga tvdhmlmesd dqkllmasda 601 gygfvctfnd lvarnragka litlpenahv mppvviedas dmllaitqag rmlmfpvsdl 661 pqlskgkgnk iinipsaeaa rgedglaqly vlppqstlti hvgkrkiklr peelqkvtge 721 rgrrgtlmrg lqridrveid sprrassgds ee