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LOCUS NP_707412 566 aa linear CON 24-AUG-2016 ACCESSION NP_707412 VERSION NP_707412.1 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 566) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 566) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 566) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 566) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 566) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN43119. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..566 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..566 /product="short chain acyl-CoA synthetase" /calculated_mol_wt=62698 Region 20..566 /region_name="PRK06087" /note="medium-chain fatty-acid--CoA ligase" /db_xref="CDD:180393" Site order(211,214..219,221..222) /site_type="other" /note="acyl-activating enzyme (AAE) consensus motif" /db_xref="CDD:341229" Site order(214,329..330,350..355,435,447,450,461,543) /site_type="other" /note="putative AMP binding site [chemical binding]" /db_xref="CDD:341229" Site order(214,254..255,302,304..305,308,329..330,350..355,435, 447,450,458..461,524) /site_type="active" /note="putative active site [active]" /db_xref="CDD:341229" Site order(254,304..305,308,329,458..460,517,524) /site_type="other" /note="putative CoA binding site [chemical binding]" /db_xref="CDD:341229" CDS 1..566 /gene="ydiD" /locus_tag="SF1529" /coded_by="complement(NC_004337.2:1562330..1564030)" /note="Code: IQ; COG: COG0318" /transl_table=11 /db_xref="GeneID:1024704" CONTIG join(WP_000553730.1:1..566) ORIGIN 1 mhptgpqlgp dvlfreskmk vtltfneqrr aayrqqglwg dasladywqq tarampdkia 61 vvdnhgasyt ysaldhaasc lanwmlakgi esgdriafql pgwceftviy laclkigavs 121 vpllpswrea elvwvlnkcq akmffaptlf kqtrpvdlil plqnqlpqlq qivgvdklap 181 atsslslsqi iadnipltta itthgdelaa vlftsgtegl pkgvmlthnn ilaserayca 241 rlnltwldvf mmpaplghat gflhgvtapf ligarsvlld iftpdaclal leqqrctcml 301 gatpfvydll nllekqpadl salrfflcgg ttipkkvare cqqrsiklls vygstessph 361 avvnldnsls rfmhtdgyaa agveikvvdd arktlppgce geeasrgpnv fmgyfdepel 421 taraldeegw yysgdlcrmd eagyikitgr kkdiivrgge nissrevedi llqhpkihda 481 cvvampderl gerscayvvl kaphhslsle emaaffsrkr vakykypehi vvieklprta 541 sdkiqkfllr kdiirrltqd vceeie