Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_706957 493 aa linear CON 24-AUG-2016 ACCESSION NP_706957 VERSION NP_706957.2 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 493) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 493) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 493) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 493) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 493) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN42664. On Dec 9, 2004 this sequence version replaced NP_706957.1. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..493 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..493 /product="synthase" /calculated_mol_wt=55782 Region 44..204 /region_name="PLDc_ymdC_like_1" /note="Putative catalytic domain, repeat 1, of Escherichia coli uncharacterized protein ymdC and similar proteins; cd09111" /db_xref="CDD:197210" Site order(150,152,165,167,183) /site_type="active" /note="putative active site [active]" /db_xref="CDD:197210" Site 150 /site_type="active" /note="catalytic site [active]" /db_xref="CDD:197210" Region 270..489 /region_name="PLDc_ymdC_like_2" /note="Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins; cd09113" /db_xref="CDD:197212" Site order(389,391,404,406,417) /site_type="active" /note="putative active site [active]" /db_xref="CDD:197212" Site 389 /site_type="active" /note="catalytic site [active]" /db_xref="CDD:197212" CDS 1..493 /gene="ymdC" /locus_tag="SF1042" /coded_by="NC_004337.2:1083600..1085081" /note="Code: I; COG: COG1502" /transl_table=11 /db_xref="GeneID:1024018" CONTIG join(WP_011069326.1:1..493) ORIGIN 1 mmkktptstk dslpnkemnd lprlasavlp lcsqhpgqcg lfplekslda faaryrlaem 61 aehtldvqyy iwqddmsgrl lfsallaaak rgvrvrllld dnntpglddi lrlldshpri 121 evrlfnpfsf rllrplgyit dfsrlnrrmh nksftvdgvv tlvggrnigd ayfgageepl 181 fsdldvmaig pvvedvaddf arywycksvs plqqvldvpe gemadrielp aswhndamth 241 rylrkmessp finhlvdgtl pliwaktrll sddpakgegk akrhsllpqr lfdimgspse 301 ridiissyfv ptragvaqll rmvrkgvkia iltnslaand vavvhagyar wrkkllrygv 361 elyelkptre qsstlhdrgi tgnsgaslha ktfsidgktv figsfnfdpr stllntemgf 421 viesetlaql idkrfiqsqy daawqlrldr wgrinwvdrh akkevilkke patsfwkrvm 481 vrlasilpve wll