Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_706425 1047 aa linear CON 24-AUG-2016 ACCESSION NP_706425 VERSION NP_706425.1 DBLINK BioProject: PRJNA62907 Assembly: GCF_000006925.2 DBSOURCE REFSEQ: accession NC_004337.2 KEYWORDS RefSeq. SOURCE Shigella flexneri 2a str. 301 ORGANISM Shigella flexneri 2a str. 301 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella. REFERENCE 1 (residues 1 to 1047) AUTHORS Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., Wen,Y., Hou,Y. and Yu,J. TITLE Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 JOURNAL Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590 REFERENCE 2 (residues 1 to 1047) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1047) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1047) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter REFERENCE 5 (residues 1 to 1047) AUTHORS Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D. TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence is identical to AAN42132. RefSeq Category: Reference Genome CLI: Clinical Isolate FGS: First Genome sequenced Method: conceptual translation. FEATURES Location/Qualifiers source 1..1047 /organism="Shigella flexneri 2a str. 301" /strain="301" /serotype="2a" /db_xref="taxon:198214" Protein 1..1047 /product="cation efflux system protein CusA" /calculated_mol_wt=114507 Region 1..1046 /region_name="ACR_tran" /note="AcrB/AcrD/AcrF family; cl47191" /db_xref="CDD:481531" CDS 1..1047 /gene="ybdE" /locus_tag="SF0481" /coded_by="NC_004337.2:496942..500085" /note="Code: P; COG: COG3696" /transl_table=11 /db_xref="GeneID:1023408" CONTIG join(WP_000573972.1:1..1047) ORIGIN 1 miewiirrsv anrflvlmga lflsiwgtwt iintpvdalp dlsdvqviik tsypgqapqi 61 venqvtyplt ttmlsvpgak tvrgfsqfgd syvyvifedg tdpywarsrv leylnqvqgk 121 lpagvsaelg pdatgvgwiy eyalvdrsgk hdladlrslq dwflkyelkt ipdvaevasv 181 ggvvkeyqvv idpqrlaqyg islaevksal dasnqeaggs sielaeaeym vrasgylqtl 241 ddfnhivlka sengvpvylr dvakvqigpk mrrgiaelng egevaggvvi lrsgknarev 301 iaavkdklet lksslpegve ivttydrsql idraidnlsg klleefivva vvcapflwhv 361 rsalvaiisl plglciafiv mpfqglnani mslggiaiav gamvdaaivm ienahkrlee 421 wqhqhpdatl dnktrwqvit dasvevgpal fislliitls fipiftlegq egrlfgplaf 481 tktyamagaa llaivvipil mgywirgkip pessnplnrf lirvyhplll kvlhwpkttl 541 lvaalsvltv lwplnkvgge flpqinegdl lympstlpgi saaeaasmlq ktdklimsvp 601 evarvfgktg kaetatdsap lemvettiql kpqdqwrpgm tmdkiieeld ntvrlpglan 661 lwvppirnri dmlstgiksp igikvsgtvl adidamaeqi eevartvpgv asalaerleg 721 gryinveinr ekaarygmtv advqlfvtsa vggamvgetv egiarypinl rypqswrdsp 781 qalrqlpilt pmkqqitlad vadvkvstgp smlktenarp tswiyidard rdmvsvvhdl 841 qkaiaekvql kpgtsvafsg qfelleranh klklmvpmtl miifvllyla frrvgealli 901 issvpfalvg giwllwwmgf hlsvatgtgf ialagvaaef gvvmlmylrh aieaepslnn 961 pqtfseqkld ealyhgavlr vrpkamtvav iiagllpilw gtgagsevms riaapmiggm 1021 itapllslfi ipaayklmwl hrhrvrn