putative cytoplasmic protein [Salmonella enterica subsp. enterica

LOCUS       NP_463351                865 aa            linear   CON 08-SEP-2022
            serovar Typhimurium str. LT2].
ACCESSION   NP_463351
VERSION     NP_463351.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 865)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 865)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 865)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 865)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL23310.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..865
                     /product="putative cytoplasmic protein"
                     /calculated_mol_wt=100040
     Region          4..856
                     /region_name="TIGR02687"
                     /note="TIGR02687 family protein"
                     /db_xref="CDD:274259"
     CDS             1..865
                     /locus_tag="STM4492"
                     /coded_by="complement(NC_003197.2:4738790..4741387)"
                     /transl_table=11
                     /db_xref="GeneID:1256018"
CONTIG      join(WP_001738657.1:1..865)
ORIGIN      
        1 mqnqefiagl kakfaehriv fwhdpdkrfl eeldnlelen vtlldmtdqs qlavkkriei
       61 depeqqfllw fphdappkef dwlldirlys tefhadfaai tlntlgipql glrehiqrrk
      121 affstkrlsa lkglvteqen easldkkmva viagvktakt eeilfslitq yvnqqkddds
      181 dlentlamlk rhdlegvlwd ilnqemgyqa ehptlenlil klfctdlsaq adpqkrewle
      241 knvlatpsgr asalafmvtw radrrykeay dycaqqmqda lrpedqyrls spydlhecet
      301 tlsieqtiih alvtqllees ttldreafkk llserqskyw cqtrqeycai ydalrqaerl
      361 lnlrnrhidg fhyqdsatfw kayceelfrf dqayrlfney allvhskgam ilkslddyie
      421 alysnwylae lsrswnkvle tenrmqewri agvprqqnfy nevvkpqfnn pqikrvfvii
      481 sdalryevae elgnqintek rftaelrsql gvlpsytqlg maallphdei cyqpgsgdiv
      541 yadglstsgt pnrdtilkky kgmavksddl lkwknqqgrd lirdyevvyi whntidamgd
      601 sasteektfe acrnavvelk dlvtrvinrl hgtriivtad hgflfqqqpl sgqdkttlqi
      661 kpdntiknhk rfiighqlpa ddfcwkgkva dtagvsdnse flipkgiqrf hfsggarfvh
      721 ggamlqevcv pvlqvkalqk taaekqpqrr pvdivkhhpl iklvnnidkv sllqthpvge
      781 lyeprtlnif ivdnannvvs gkericfdsd nntmekrvrd vtlkliganf nrrneywlil
      841 edaqtetgyq kypviidlaf qddff