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LOCUS NP_463335 951 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_463335 VERSION NP_463335.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 951) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 951) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 951) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 951) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL23294. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..951 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..951 /product="valine tRNA synthetase" /EC_number="6.1.1.9" /calculated_mol_wt=108045 Region 1..949 /region_name="ValS" /note="Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; COG0525" /db_xref="CDD:440291" CDS 1..951 /gene="valS" /locus_tag="STM4475" /coded_by="complement(NC_003197.2:4717031..4719886)" /note="similar to E. coli valine tRNA synthetase (AAC77215.1); Blastp hit to AAC77215.1 (951 aa), 96% identity in aa 1 - 951" /transl_table=11 /db_xref="GeneID:1256001" CONTIG join(WP_000416329.1:1..951) ORIGIN 1 mektynpqdi eqplyehwek qgyfkpngde skesfcimip ppnvtgslhm ghafqqtimd 61 tmiryqrmqg kntlwqvgtd hagiatqmvv erkiaaeegk trhdygrdaf idkiwqwkae 121 sggtitrqmr rlgnsvdwer erftmdegls navkevfvrl ykedliyrgk rlvnwdpklr 181 taisdleven reskgsmwhi rypladgakt adgkdylvva ttrpetilgd tgvavnpedp 241 ryqsligkfv ilplvnrrip ivgdehadme kgtgcvkitp ahdfndyevg krhalpmini 301 ltfdgdires aevfdtkgee sdvysseipa efqklerfaa rkavvaavda lglleeikph 361 dltvpygdrg gvviepmltd qwyvradvla kpaveaveng diqfvpkqye nmyfswmrdi 421 qdwcisrqlw wghripawyd ndgnvyvgrt edevrqennl gadvalrqde dvldtwfssa 481 lwtfstlgwp entdalrqfh ptsvmvsgfd iiffwiarmi mmtmhfikde ngkpqvpfht 541 vymtglirdd egqkmskskg nvidpldmvd gislpellek rtgnmmqpqm aekirkrtek 601 qfpngiephg tdalrftlaa lastgrdinw dmkrlegyrn fcnklwnasr fvlmnteeqd 661 cgfnggemtl sladrwilae fnqtvkayrd aldsfrfdia agilyeftwn qfcdwylelt 721 kpvmtggses elrgtrhtlv tvlegllrla hpiipfitet iwqrvkvicg itadtimlqp 781 fpeynaaqvd eaaladtewl kqaivavrni raemniapgk plelllrgcs eeavrrvndn 841 rsflqtlarl esitvlpadd kgpvsvtkii dgaellipma glinkddela rlakevakie 901 geiariegkl snegfvarap eaviakerek ldgyaeakak lieqqavisa l