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LOCUS NP_463211 1108 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_463211 VERSION NP_463211.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1108) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1108) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1108) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1108) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL23170. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1108 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1108 /product="putative periplasmic binding protein" /calculated_mol_wt=123266 Region 1..1108 /region_name="PRK10929" /note="putative mechanosensitive channel protein; Provisional" /db_xref="CDD:236798" CDS 1..1108 /gene="yjeP" /locus_tag="STM4347" /coded_by="complement(NC_003197.2:4589249..4592575)" /note="similar to E. coli putative periplasmic binding protein (AAC77119.1); Blastp hit to AAC77119.1 (1107 aa), 89% identity in aa 1 - 1107" /transl_table=11 /db_xref="GeneID:1255873" CONTIG join(WP_001236755.1:1..1108) ORIGIN 1 mrliiaflma wclstgafaa tapdakqitq eleqakaakp aqpeavealq talnaleerk 61 gslerakqyq hvidnfpkls atlraqlnnl rdeprsvppe mstealnqei lqvssqlldk 121 treaqqeqer vreiadslsq lpqqqndarr qlneierrlg aaggsaalsq aqslsmqaes 181 aklkalvdel elaqlsannr qelarlrsel aekqsqqlda ylqalrnqln slrqreaera 241 lestellaen saglpegive qfkvnrelsq alnqqaqrmd lvasqqrqat sqtlqvrqal 301 ntlreqsqwl gvsnmlgeal raqvarlpem pkpqqldtem aqlrvhrmry eellnkqpql 361 rqirqangqp ltaeqnqild aqlrtqrell nsllqggdtl ileltklkvs nsqledalke 421 vneathrylf wtadvsplsl swpvdlvqdl rrlisldtfn qlgkasimml tsketllplf 481 galalvgfsl ysrqhfnrfl ersasrvgkv tqdhfsltlr tvfwsilvas plpvlwatlg 541 yglqeawpyp lavaigdgvt atvpllwvvm icaafarpng lfvahfgwpr nrvakamryy 601 lmsiglivpl imavimfdnl ndrefsgslg rlcfilicga lalvtlslkk agiplyldke 661 gngdnmvnsl lwnmlmgapl iailaaavgy lataqallar letsvaiwfl llviyhvirr 721 wmliqrrrla fdrakhrrae mlaqrargee epahsssleg avdideseid ldaisaqslr 781 lvrsilmlia llsvivlwse ihsafgflen islwdvtstv qgveslepit lgavliailv 841 fiittqlvrn lpallelall qhldltpgtg yaittitkyl lmligglvgf smigiewskl 901 qwlvaalgvg lgfglqeifa nfisgliilf ekpirigdtv tirdltgsvt kintrattis 961 dwdrkeiivp nkafiteqfi nwslsdsvtr vvltipapad anseevtqil ltaaqrcslv 1021 ldnpppeifl vdlqqgiqif elriyaaemg hrmplrheih qlilagfreh gidmpfppfq 1081 mrleslggkq tgrtltsagk tsrpagsl