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LOCUS NP_463022 1342 aa linear CON 08-SEP-2022 serovar Typhimurium str. LT2]. ACCESSION NP_463022 VERSION NP_463022.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1342) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1342) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1342) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1342) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22981. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1342 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1342 /product="RNA polymerase, beta subunit" /EC_number="2.7.7.6" /calculated_mol_wt=150471 Region 1..1342 /region_name="rpoB" /note="DNA-directed RNA polymerase subunit beta; Reviewed; PRK00405" /db_xref="CDD:234749" Region 972..1029 /region_name="HMG-box_SF" /note="high mobility group (HMG)-box domain superfamily; cl00082" /db_xref="CDD:469606" CDS 1..1342 /gene="rpoB" /locus_tag="STM4153" /coded_by="NC_003197.2:4365921..4369949" /note="DNA-directed RNA polymerase beta chain. (SW:RPOB_SALTY)" /transl_table=11 /db_xref="GeneID:1255679" CONTIG join(WP_000263106.1:1..1342) ORIGIN 1 mvysytekkr irkdfgkrpq vldvpyllsi qldsfqkfie qdpegqygle aafrsvfpiq 61 sysgnselqy vsyrlgepvf dvqecqirgv tysaplrvkl rlviyereap egtvkdikeq 121 evymgeiplm tdngtfving tervivsqlh rspgvffdsd kgkthssgkv lynariipyr 181 gswldfefdp kdnlfvridr rrklpatiil ralnytteqi ldlffekvvf eirdnklqme 241 liperlrget asfdieangk vyvekgrrit arhirqlekd dikhievpve yiagkvvskd 301 yvdestgeli caanmelsld llaklsqsgh krietlftnd ldhgpyiset vrvdptndrl 361 salveiyrmm rpgepptrea aeslfenlff sedrydlsav grmkfnrsll rdeiegsgil 421 skddiidvmk klidirngkg evddidhlgn rrirsvgema enqfrvglvr veravkerls 481 lgdldtlmpq dminakpisa avkeffgssq lsqfmdqnnp lseithkrri salgpggltr 541 eragfevrdv hpthygrvcp ietpegpnig linslsvyaq tneygfletp yrrvvdgvvt 601 deihylsaie egnyviaqan snlddeghfv edlvtcrskg esslfsrdqv dymdvstqqv 661 vsvgaslipf lehddanral mganmqrqav ptlradkplv gtgmeravav dsgvtavakr 721 ggtvqyvdas rivikvnede mypgeagidi ynltkytrsn qntcinqmpc vslgepverg 781 dvladgpstd lgelalgqnm rvafmpwngy nfedsilvse rvvqedrftt ihiqelacvs 841 rdtklgpeei tadipnvgea alskldesgi vyigaevtgg dilvgkvtpk getqltpeek 901 llraifgeka sdvkdsslrv pngvsgtvid vqvftrdgve kdkraleiee mqlkqakkdl 961 seelqileag lfsriravlv ssgveaekld klprdrwlel gltdeekqnq leqlaeqyde 1021 lkhefekkle akrrkitqgd dlapgvlkiv kvylavkrri qpgdkmagrh gnkgviskin 1081 piedmpyden gtpvdivlnp lgvpsrmnig qilethlgma akgigdkina mlkqqqevak 1141 lrefiqrayd lgadvrqkvd lstfsddevl rlaenlrkgm piatpvfdga keaeikellk 1201 lgdlptsgqi tlfdgrtgeq ferpvtvgym ymlklnhlvd dkmharstgs yslvtqqplg 1261 gkaqfggqrf gemevwalea ygaaytlqem ltvksddvng rtkmyknivd gnhqmepgmp 1321 esfnvllkei rslginiele de