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LOCUS NP_462917 1016 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_462917 VERSION NP_462917.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1016) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1016) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1016) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1016) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22876. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1016 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1016 /product="formate dehydrogenase" /EC_number="1.17.1.9" /calculated_mol_wt=112392 Region 2..1015 /region_name="Molybdopterin-Binding" /note="Molybdopterin-Binding (MopB) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum- and...; cl09928" /db_xref="CDD:447860" Site order(50,52..53,57,92,238..239) /site_type="other" /note="[4Fe-4S] binding site [ion binding]" /db_xref="CDD:239153" Site order(94,192,196,230,232,235..236,259..261,278,280, 409..411,414..415,447..448,556..558,562,582..584,587,617, 649) /site_type="other" /note="molybdopterin cofactor binding site" /db_xref="CDD:239153" CDS 1..1016 /gene="fdoG" /locus_tag="STM4037" /coded_by="complement(NC_003197.2:4244771..4247821)" /note="similar to E. coli formate dehydrogenase-O, major subunit (AAD13456.1); Blastp hit to AAD13456.1 (1016 aa), 93% identity in aa 1 - 1016" /transl_table=11 /db_xref="GeneID:1255563" CONTIG join(WP_010989087.1:1..1016) ORIGIN 1 mqvsrrqffk icaggmagtt aaalgfapgv alaetrqykl lrtretrntc tycsvgcgll 61 myslgdgakn akasifhieg dpdhpvsrga lcpkgaglvd fihsesrlkf pqyrapgsdk 121 wqqisweeaf driaklmked rdanyqaqna egvtvnrwlt tgmlcasass netgyltqkf 181 sralgmlavd nqarvuhgpt vaslaptfgr gamtnhwvdi knanlvvvmg gnaaeahpvg 241 frwameakih ngaklividp rftrtasvad fyapirsgtd iaflsgvmly lltnekynre 301 yteaytnasl ivredfgfdd glftgydadk rqydktswhy eldengfakh dttlqhprcv 361 wnllkqhvsr ytpdmvenic gtpkadflkv ceyiaetsak dktasflyal gwtqhsigaq 421 nirtmamiql llgnmgmagg gvnalrghsn iqgltdlgll sqslpgyltl psekqtdlqt 481 ylaantpkpl lkdqvnywgn ypkffvsmmk affgdkatae nswgfdwlpk wdkgydvlqy 541 femmkqgkvn gyicqgfnpv asfpnknkvv aslsklkylv tidplntets tfwqnhgesn 601 dvdpakiqte vfrlpstcfa eengsivnsg rwlqwhwkga dapgiamtdg eilagiflrl 661 rkmyseqgga npeqvlnmtw nytkpyepas eevamesngk aladlidpat gavvvkkgqq 721 lssfaqlrdd gttssgcwif agswtpegnm marrdnadps glgntlgwaw awplnrrily 781 nrasadpqgn pwdpkrqllk weggkwagwd ipdysaaapg sdvgpfimqp egmgrlfaid 841 kmaegpfpeh yepfetplgt nplhpnvisn paarifkdda dalgkadkfp yvgttyrlte 901 hfhywtkhal lnaiaqpeqf veigeklank lgiahgdtvk vssnrgyika kavvtkrirt 961 lkadgkdidt igipihwgye gvakkgfian tltpfvgdan tqtpefksfl vnvekv