GTP-binding elongation factor family protein [Salmonella enterica

LOCUS       NP_462889                607 aa            linear   CON 08-SEP-2022
            subsp. enterica serovar Typhimurium str. LT2].
ACCESSION   NP_462889
VERSION     NP_462889.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 607)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 607)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 607)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL22848.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..607
                     /product="GTP-binding elongation factor family protein"
                     /calculated_mol_wt=67246
     Region          1..606
                     /region_name="TypA"
                     /note="Predicted membrane GTPase TypA/BipA involved in
                     stress response [Signal transduction mechanisms]; COG1217"
                     /db_xref="CDD:440830"
     CDS             1..607
                     /gene="typA"
                     /locus_tag="STM4009"
                     /coded_by="NC_003197.2:4217397..4219220"
                     /note="similar to E. coli putative GTP-binding factor
                     (AAC76868.1); Blastp hit to AAC76868.1 (591 aa), 96%
                     identity in aa 1 - 591"
                     /transl_table=11
                     /db_xref="GeneID:1255535"
CONTIG      join(WP_000572067.1:1..607)
ORIGIN      
        1 mienlrniai iahvdhgktt lvdkllqqsg tfdaraetqe rvmdsndlek ergitilakn
       61 taikwndyri nivdtpghad fggevervms mvdsvllvvd afdgpmpqtr fvtkkafahg
      121 lkpivvinkv drpgarpdwv vdqvfdlfvn ldatdeqldf piiyasalng iagldhedma
      181 edmtplyqai vdhvpapdvd ldgplqmqis qldynnyvgv igigrikrgk vkpnqqvtii
      241 dsegktrnak vgkvlthlgl eridsniaea gdiiaitglg elnisdticd pqnvealpal
      301 svdeptvsmf fcvntspfcg kegkfvtsrq ildrlnkelv hnvalrveet edadafrvsg
      361 rgelhlsvli enmrregfel avsrpkvifr eidgrkqepy envtldveeq hqgsvmqalg
      421 erkgdlknmn pdgkgrvrld yvipsrglig frsefmtmts gtgllystfs hyddirpgev
      481 gqrqngvlis ngqgkavafa lfglqdrgkl flghgaevye gqiigihsrs ndltvncltg
      541 kkltnmrasg tdeavilvpp ikmsleqale fidddelvev tptsirirkr hltendrrra
      601 nrgqkee