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LOCUS NP_462868 729 aa linear CON 08-SEP-2022 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. ACCESSION NP_462868 VERSION NP_462868.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 729) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 729) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 729) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 729) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22827. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..729 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..729 /product="3-hydroxyacyl-coA dehydrogenase of 4-enzyme FadB protein" /EC_number="4.2.1.17" /EC_number="5.1.2.3" /EC_number="2.3.1.16" /EC_number="1.1.1.35" /calculated_mol_wt=79463 Region 1..715 /region_name="fadB" /note="fatty acid oxidation complex subunit alpha FadB; PRK11730" /db_xref="CDD:183293" CDS 1..729 /gene="fadB" /locus_tag="STM3983" /coded_by="complement(NC_003197.2:4189323..4191512)" /note="similar to E. coli 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase (AAC76849.1); Blastp hit to AAC76849.1 (729 aa), 95% identity in aa 1 - 729" /transl_table=11 /db_xref="GeneID:1255509" CONTIG join(WP_000965998.1:1..729) ORIGIN 1 mlykgdtlyl dwledgiael vfdapgsvnk ldtatvaslg qalevlekqh dlkglllrsn 61 kaafivgadi teflslflvp eeqlsqwlhf ansvfnrled lpvptlaavn gyalgggcec 121 vlatdyrlat pdlriglpet klgimpgfgg svrlprmlga dsaleiiaag kdvgaehalk 181 iglvdgvvkq ekliegaiav lrqaitgdld wrakrqpkle plklskieaa msftiakgmv 241 aqtagkhypa pmtavktiea aarfgreeal nlenksfvpl ahtnearalv giflndqyvk 301 gkakkltkdi etpkqaavlg agimgggiay qsawkgvpvi mkdindksln lgmteaakll 361 nkqlergkid glklagvist ihptldyagf drvdvvveav venpkvkkav laeteqkvrp 421 etvlasntst ipigelasal erpenfcgmh ffnpvhrmpl veiirgekss detiakvvaw 481 askmgktpiv vndcpgffvn rvlfpyfagf sqllrdgadf rkvdkvmekq fgwpmgpayl 541 ldvvgidtah haqavmaagf pqrmqkdyrd aidalfdasr fgqknglgfw rykedskgkp 601 kkeedaavdd llasvsqpkr dfsddeiiar mmipminevv rcleegiias paeadmalvy 661 glgfppfhgg afrwldtqgs akyldmaqqy qhlgplyevp eglrnkarhn epyyppvepa 721 rpvgslkta