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sensory kinase in multi-component regulatory system with TorR


LOCUS       NP_462726                911 aa            linear   CON 08-SEP-2022
            (regulator) and TorT (periplasmic sensor) [Salmonella enterica
            subsp. enterica serovar Typhimurium str. LT2].
ACCESSION   NP_462726
VERSION     NP_462726.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 911)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 911)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 911)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 911)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL22685.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..911
                     /product="sensory kinase in multi-component regulatory
                     system with TorR (regulator) and TorT (periplasmic
                     sensor)"
                     /EC_number="2.7.3.-"
                     /calculated_mol_wt=100143
     Region          3..911
                     /region_name="PRK11466"
                     /note="hybrid sensory histidine kinase TorS; Provisional"
                     /db_xref="CDD:236914"
     CDS             1..911
                     /gene="torS"
                     /locus_tag="STM3826"
                     /coded_by="NC_003197.2:4026464..4029199"
                     /note="regulates tor operon; similar to E. coli sensor
                     protein torS (regulator TorR) (AAC74078.1); Blastp hit to
                     AAC74078.1 (904 aa), 62% identity in aa 1 - 896"
                     /transl_table=11
                     /db_xref="GeneID:1255353"
CONTIG      join(WP_000106953.1:1..911)
ORIGIN      
        1 mstpsltrrl wlafalmaal tllstvigwi slrvisqveq tntqallptm nmarqlseas
       61 ayelfsaqnl tnadsegvwl aqgkmlkaqs lkinhllqal seqgfntsai arqekeiaqt
      121 lgqqgtlvge iltlraqqqq lsrqiaeaae siaaqahgqa nnaatsagat qagiydlies
      181 gkgdqaeral drlididley vnqmnelrvn alrfkqlivt lkdaqglsda edtdeklnql
      241 vkilsrrqqr iedptvraqi adaletinqy ttlvtlfrke nairdqlqtl mannlfqftr
      301 fstevsqlvn aiekrneagl arlthasqrg qiglvilgil alcslsfilw rvvyrsvsrp
      361 laqqtqalqr llegdidspf peaagvseld tisrlmeafr anvrklnrhr edlaeqvrsq
      421 taelhalvle hrqaraeaek aneakstfla amsheirtpl ygilgtvqll adkplmtnyr
      481 ddlqaindsg esllailndi ldysaievgg tnvsiseepf eprqllnsal hlmhsrvqva
      541 litdfseqlp stlqgdprri rqivinllsn aakftdrgsi vlrtfcddqs wfievedtgc
      601 gipeakltai fkpfvqatgr rggtglglai saslaeamgg tltvtstlhv gscfrlqlpv
      661 chskpasksa frepinlngl rllliednml tqritaemlt gkgvkvslae sandalrcla
      721 egesfdvalv dfdlpdydgl tlaqqlmsly pamkrigfsa hviddnlrqr taglfcgiiq
      781 kpvpreelyr miahylqgks hnaramlneh qlagdmasvg peklrqwval fkdsalplve
      841 eieaaramnd dvnikrlahk lksgcaslgm tqateacrel elqplsdidi ktivtqgvta
      901 ldawiaghps p