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LOCUS NP_462672 932 aa linear CON 08-SEP-2022 subsp. enterica serovar Typhimurium str. LT2]. ACCESSION NP_462672 VERSION NP_462672.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 932) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 932) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 932) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 932) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22631. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..932 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..932 /product="putative NtrC family transcriptional regulator" /calculated_mol_wt=104824 Region 1..832 /region_name="PspF" /note="Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; COG1221" /db_xref="CDD:440834" Region 838..932 /region_name="PRD" /note="PRD domain; pfam00874" /db_xref="CDD:459973" CDS 1..932 /locus_tag="STM3773" /coded_by="complement(NC_003197.2:3972561..3975359)" /note="ATPase domain; similar to E. coli psp operon transcriptional activator (AAC74385.1); Blastp hit to AAC74385.1 (330 aa), 33% identity in aa 12 - 239" /transl_table=11 /db_xref="GeneID:1255297" CONTIG join(WP_001252675.1:1..932) ORIGIN 1 mrrieivlge lerltrglcl adlaqetaft aeaigfnlgl arnsvskdln qlwndglaik 61 srgrpvyflh rqaletllgr qleeserevr svadvlphee hyapddpfts ligydrslrd 121 avekgraavl yphglhvllt gpsgvgktff aelmhrface qasgaipplv yfncaeyahn 181 pellsshlfg hrqgaftgan ehktglveqa dggyllldev hrlsyegqek lfsildkgey 241 rplgvssqpr sisvrlicat tepvgsallr tfqrriqvci dlpgirqrsv eeqielivgf 301 lqresrkier tvsidkplll wllnkplegn igqlksdiqf lcaqawasgm tehndtlqld 361 krlaemsvnp tpeqrllvdt lfegkarlni dartlpalkt slatgaeiee sdlfysfltr 421 eyvnlrnsnv ppaetlailk nklssifeyg lysrdsvahp prygdqieer vtlligcveq 481 vlgfslpenl vnplrkhfla ligyvqrgli pqlyssslil drckdeydna tllcrkinel 541 lhiqcpatev vwlclflkec rhyrqridas pdcgviliah gattatsqaq yvnrvlerel 601 fsaidmpfeq svhdtletlt qmiqtrqyrr lillvdigsl ihfgstiskl fqidvllmpn 661 itltsllevg ldlsyetsdl pqltallqsk nipcqlctpq qenggkvlvi scitgmgtae 721 kikkvleesf gelmsqdtrm vildynevrs lervqqalna serlagivgt fqpglpdipf 781 isleelfseq gpelvlsllt pdlsnaerrl emersamrfi saltmesiin hisvlnpqri 841 lkemegvfnh ltsslslkps rqvtlrflih cccmverivi nrkplqmale sqpnldaraf 901 sviksaflpi edayairlsd aeyfyiyell ys