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LOCUS NP_462656 955 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_462656 VERSION NP_462656.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 955) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 955) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 955) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 955) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22615. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..955 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..955 /product="putative autotransported protein" /calculated_mol_wt=101086 Region 1..955 /region_name="PRK15313" /note="intestinal colonization autotransporter adhesin MisL" /db_xref="CDD:237940" CDS 1..955 /gene="misL" /locus_tag="STM3757" /coded_by="NC_003197.2:3954773..3957640" /note="Pathogenicity island encoded protein: SPI3; MisL (gi|4324610)" /transl_table=11 /db_xref="GeneID:1255281" CONTIG join(WP_001143053.1:1..955) ORIGIN 1 mptpqnysfi aiavsaalas mvfpsqaawv dvdslpssgl vsqlppelqa iipaqastgf 61 tkvgtmpnyv yqwntgtipv ygngltlngp gaeafehtvt viqnsgtgsp gvifgndlti 121 rtqsanaann grdvdgirth gantpdnpvf iitgdrtriy vdgqdgdgin agynslgqgw 181 tgsaniyvgd dlyikttgsq grgitanamr dasrakntiv vgnrahivtt gdsseglrtg 241 qsgslirlgd datietsgas stgiyaasss rtelgnnati tvngasahav yatnatvnlg 301 enatisvnsa skaasyskap aglyalsrga inlaggaait magdnssesy aistetggiv 361 dgssggrfvi dgdiraagat aasgtlpqqn stiklnmtdn srwdgasyit satagtgvis 421 vqmsdatwnm tssstltdlt lnsgatinfs hedgepwqtl tinedyvgng gklvfntvln 481 dddsetdrlq vlgntsgntf vavnniggag aqtiegieiv nvagnsngtf ekasrivaga 541 ydynvvqkgk nwyltsyiep depiipdpvd pvipdpvvpd pvdpdpvdpv ipdpvipdpv 601 dpdpvdpepv dpvipdptip digqsdtppi tehqfrpevg sylannyaan tlfmtrlhdr 661 lgetqytdml tgekkvtslw mrnvgahtrf ndgsgqlktr insyvlqlgg dlaqwstdgl 721 drwhigamag yansqnrtls svsdyhsrgq vtgysvglyg twyannidrs gayvdtwmly 781 nwfdnkvmgq dqaaekyksk gitasveagy sfrlgesahq sywlqpkaqv vwmgvqaddn 841 reangtlvkd dtagnlltrm gvkayinghn aidndksref qpfveanwih ntqpasvkmd 901 dvssdmrgtk nigelkvgie gqvtprlnvw gnvaqqvgdt gysdtqgmlg mkysf