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LOCUS NP_462301 1037 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_462301 VERSION NP_462301.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1037) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1037) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1037) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1037) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22260. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1037 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1037 /product="RND family multidrug transport protein" /note="acriflavin resistance protein F" /calculated_mol_wt=112397 Region 1..1037 /region_name="PRK15127" /note="multidrug efflux RND transporter permease subunit AcrB" /db_xref="CDD:185081" CDS 1..1037 /gene="acrF" /locus_tag="STM3391" /coded_by="NC_003197.2:3562280..3565393" /note="similar to E. coli integral transmembrane protein; acridine resistance (AAC76298.1); Blastp hit to AAC76298.1 (1034 aa), 22% identity in aa 1 - 506" /transl_table=11 /db_xref="GeneID:1254914" CONTIG join(WP_001273286.1:1..1037) ORIGIN 1 manffirrpi fawvlaiilm magalaimql pvaqyptiap pavsisatyp gadaqtvqdt 61 vtqvieqnmn gidnlmymss tsdsagsvti tltfqsgtdp diaqvqvqnk lqlatpllpq 121 evqqqgisve kssssflmva gfvsdnpntt qddisdyvas nikdsisrln gvgdvqlfga 181 qyamriwlda nllnkyqltp vdvinqlkvq ndqiaagqlg gtpalpgqql nasiiaqtrl 241 kdpeefgkvt lrvntdgsvv hlkdvariel ggenynvvar ingkpasglg iklatganal 301 dtataikvkl aelqpffpqg mkvvypydtt pfvkisihev vktlfeaiil vflvmylflq 361 niratlipti avpvvllgtf avlaafgysi ntltmfgmvl aigllvddai vvvenvervm 421 mednlsprea teksmsqiqg alvgiamvls avfipmaffg gstgaiyrqf sitivsamal 481 svlvaliltp alcatllkpv saehhekksg ffgwfntrfd hsvnhytnsv sgivrntgry 541 liiyllivvg mavlflrlpt sflpeedqgv fltmiqlpsg atqertqkvl dqvthyylnn 601 ekanvesvft vngfsfsgqg qnsgmafvsl kpweerngee nsveaviara trafsqirdg 661 lvfpfnmpai velgtatgfd felidqgglg hdaltkarnq llgmvakhpd llvrvrpngl 721 edtpqfkldv dqekaqalgv slsdinetis aalggyyvnd fidrgrvkkv yvqadaqfrm 781 lpgdinnlyv rsangemvpf stfssarwiy gsprleryng mpsmellgea apgrstgeam 841 slmenlasql pngigydwtg msyqerlsgn qapalyaisl ivvflclaal yeswsipfsv 901 mlvvplgvvg allaaslrgl nndvyfqvgl lttiglsakn ailivefakd lmekegrgli 961 eatleasrmr lrpilmtsla filgvmplvi srgagsgaqn avgtgvmggm ltatllaiff 1021 vpvffvvvkr rfnrhhd