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LOCUS NP_462199 892 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_462199 VERSION NP_462199.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 892) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 892) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 892) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 892) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL22158. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..892 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..892 /product="protein chain initiation factor IF-2" /calculated_mol_wt=97271 Region <7..279 /region_name="PTZ00121" /note="MAEBL; Provisional" /db_xref="CDD:173412" Region 57..95 /region_name="IF2_assoc" /note="Bacterial translation initiation factor IF-2 associated region; pfam08364" /db_xref="CDD:429947" Region 316..366 /region_name="IF2_N" /note="Translation initiation factor IF-2, N-terminal region; pfam04760" /db_xref="CDD:428110" Region 390..891 /region_name="InfB" /note="Translation initiation factor IF-2, a GTPase [Translation, ribosomal structure and biogenesis]; COG0532" /db_xref="CDD:440298" CDS 1..892 /gene="infB" /locus_tag="STM3286" /coded_by="complement(NC_003197.2:3453617..3456295)" /note="translation initiation factor IF-2. (SW:IF2_SALTY)" /transl_table=11 /db_xref="GeneID:1254809" CONTIG join(WP_000133064.1:1..892) ORIGIN 1 mtdvtlkala aerqvsvdrl vqqfadagir ksaddsvsaq ekqtllahln reavsgpdkl 61 tlqrktrstl nipgtggksk svqievrkkr tfvkrdpqea erlaaeeqaq reaeeqarre 121 aeeqakreaq qkaereaaeq akreaaekak reaaekdkvs nqqtddmtkt aqaekarren 181 eaaelkrkae eearrkleee arrvaeearr maeenkwtat pepvedtsdy hvttsqharq 241 aedendreve ggrgrgrnak aarpakkgkh aeskadreea raavrggkgg krkgsslqqg 301 fqkpaqavnr dvvigetitv gelankmavk gsqvikammk lgamatinqv idqetaqlva 361 eemghkvilr reneleeavm sdrdtgaaae prapvvtimg hvdhgktsll dyirstkvas 421 geaggitqhi gayhvetdng mitfldtpgh aaftsmrarg aqatdivvlv vaaddgvmpq 481 tieaiqhaka agvpvvvavn kidkpeadpd rvknelsqyg ilpeewgges qfvhvsakag 541 tgidelldai llqaevlelk avrkgmasga viesfldkgr gpvatvlvre gtlhkgdivl 601 cgfeygrvra mrnelgqevl eagpsipvei lglsgvpaag devtvvrdek karevalyrq 661 gkfrevklar qqksklenmf anmtegevhe vnivlkadvq gsveaisdsl lklstdevkv 721 kiigsgvggi tetdatlaaa snailvgfnv radasarkvi esesldlryy sviynlidev 781 kaamsgmlsp elkqqiigla evrdvfkspk fgaiagcmvt egtikrhnpi rvlrdnvviy 841 egeleslrrf kddvnevrng mecgigvkny ndvrvgdmie vfeiieiqrt ia