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LOCUS NP_461969 957 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_461969 VERSION NP_461969.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 957) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 957) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 957) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 957) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21928. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..957 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..957 /product="glycine cleavage complex protein P" /EC_number="1.4.4.2" /calculated_mol_wt=104157 Region 17..950 /region_name="gcvP" /note="glycine dehydrogenase (decarboxylating); TIGR00461" /db_xref="CDD:273089" CDS 1..957 /gene="gcvP" /locus_tag="STM3053" /coded_by="complement(NC_003197.2:3212143..3215016)" /note="glycine decarboxylase; similar to E. coli glycine decarboxylase, P protein of glycine cleavage system (AAC75941.1); Blastp hit to AAC75941.1 (957 aa), 96% identity in aa 1 - 957" /transl_table=11 /db_xref="GeneID:1254576" CONTIG join(WP_000194975.1:1..957) ORIGIN 1 mtqtlsqlen rgafierhig pdaaqqqeml navgaeslna ltgqivpkdi qlatppqvge 61 aateyaalae lkaiagrnkr ftsyigmgyt avqlppvilr nmlenpgwyt aytpyqpevs 121 qgrleallnf qqvtldltgl dmasasllde ataaaeamam akrvsklkna nrffvasdvh 181 pqtldvvrtr aetfgfdviv ddaakaldhq dvfgvllqqv gttgeihdys alitelksrk 241 vvvsvaadfm alvlltapgk qgadivfgsa qrfgvpmgyg gphaaffaak defkrsmpgr 301 iigvskdaag ntalrmamqt reqhirreka nsnictsqvl laniaslyav yhgpvglkri 361 anrihrltdi laaglqqkgl klrhahyfdt lcvevadkaa vlaraeaaei nlrsdihnav 421 gitldetttr envaqlfnvl lgdshglnie tldkdvalds rsiqqsmlrd dailthpvfn 481 ryhsetemmr ymhslerkdl alnqamiplg sctmklnaaa emipitwpef aelhpfcppe 541 qaegyhqmis qlsdwlvklt gydavcmqpn sgaqgeyagl lairhyhesr neghrdicli 601 pasahgtnpa sahmagmqvv vvacdkngni dlddlrakae qhaanlscim vtypsthgvy 661 eetirevcev vhqfggqvyl dganmnaqvg itspgfigad vshlnlhktf ciphggggpg 721 mgpigvkahl apfvpghsvv qiegmltrqg avsaapfgsa silpiswmyi rmmgaeglkq 781 asqvailnan yiasrlkday pvlytgrdgr vahecildir plkeetgise ldiakrlidy 841 gfhaptmsfp vagtlmvept esegkaeldr fidamlaira eidqvkagvw plednplvna 901 phiqselvae wahpysreva vfpagvadky wptvkrlddv ygdrnlfcsc vpisdyq