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LOCUS NP_461913 1123 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_461913 VERSION NP_461913.2 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1123) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1123) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1123) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1123) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21872. On Dec 2, 2016 this sequence version replaced NP_461913.1. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1123 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1123 /product="exonuclease V, subunit" /EC_number="3.1.11.5" /calculated_mol_wt=128915 Region 1..1122 /region_name="recC" /note="exodeoxyribonuclease V subunit gamma; PRK11069" /db_xref="CDD:236835" CDS 1..1123 /gene="recC" /locus_tag="STM2996" /coded_by="complement(NC_003197.2:3152718..3156089)" /note="similar to E. coli DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease (AAC75861.1); Blastp hit to AAC75861.1 (1122 aa), 88% identity in aa 1 - 1122" /transl_table=11 /db_xref="GeneID:1254519" CONTIG join(WP_000946827.1:1..1123) ORIGIN 1 mlrvyhsnrl dvlealmefi vererlddpf epemilvqst gmaqwlqmtl sqkfgiaani 61 afplpasfiw emfvrvlpdi pkesafskqs mswklmtllp qlldkdefvl lrhyltddtd 121 krklfqlsar aadlfdqylv yrpdwltqwe agktveglge aqnwqaplwk alveytaalg 181 qprwhranly qrfiqtlesa tacppglpsr vficgisalp pvylralqal gkhieihllf 241 tnpcryywgd ikdpawlakl marqrrhsfe drhlplfren qnpealfnsd geqdignpll 301 aswgklgrdy iyllselens qeldafvdit pdnllhriqa dileleshav agvnleeysr 361 sdnkrlldpe dnslsfhvch spqreveilh drllamlead ptltprdiiv mvadidsysp 421 fiqavfgsap terylpyais drrarqshpv lqafisllsl pdsrfvsedv lalldvpvla 481 arftineegl rylrlwvnes girwgidddn vrelelpatg qhtwqfgltr mllgyamesa 541 qgewqsvlpy dessgliael vghlasllmq lniwrrglaq erpleewlpv crdmfndffl 601 pdadteaamt lieqqwqaii aegvaaeygd avpisllrde laqrldqeri sqrflagpin 661 ictlmpmrsi pfrvvcllgm ndgvyprqla plgfdlmsqk pmrgdrsrrd ddrylfleal 721 isaqqtlyis yigrsiqdns erfpsvlvqe lvdyigqshy lpgdetltcd esearvkahi 781 trlhtrmpfd aqnyqpgeqq syarewlpaa sqsgkahsdf vqplpftmpe tltleslqrf 841 wahpvraffq mrlqvnfrse eseipdaepf elegltryql nqqllntlve eddaerlfrr 901 fraagelpyg afgeifwdaq cqemqqlasr viacrkpsqs levdllcngv qltgwlpqvq 961 edgllrwrpa lisvaqgvql wlehlvycas ggsgesrlfl rkegewrfpp ldktqamayl 1021 aqliegyreg msspllvlpe sggawikacy daendvmldd ddtlqkartk flqayegnmm 1081 vsgegediwy qrlwrqlese tlqaiiaqsr hyllplfrfn qsr