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LOCUS NP_461912 962 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_461912 VERSION NP_461912.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 962) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 962) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 962) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 962) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21871. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..962 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..962 /product="protease III" /EC_number="3.4.24.55" /calculated_mol_wt=107356 Region 1..960 /region_name="PRK15101" /note="protease3; Provisional" /db_xref="CDD:185056" CDS 1..962 /gene="ptr" /locus_tag="STM2995" /coded_by="complement(NC_003197.2:3149652..3152540)" /note="similar to E. coli protease III (AAC75860.1); Blastp hit to AAC75860.1 (962 aa), 88% identity in aa 1 - 962" /transl_table=11 /db_xref="GeneID:1254518" CONTIG join(WP_001138254.1:1..962) ORIGIN 1 mprstwfkal lllvalwgpa vqadigwqpl qetirksdkd trqyqairld ndmvvllvsd 61 pqavkslsal vvpvgsledp eahqglahyl ehmclmgskk ypqadslaey lkrhggshna 121 stapyrtafy levendalpg avdrladaia apllnkkyae rernavnael tmartrdgmr 181 maqvsaetin pahpgshfsg gnletlsdkp gnpvqqalia fhekyyssnl mkaviysnkp 241 lpelasiaaa tygrvpnkqi kkpeitvpvi teaqkgiiih yvpalprkvl rvefridnns 301 aqfrsktdel vsylignrsp gtlsdwlqkq glvegisads dpivngnsgv faisatltdk 361 glanrdevva aifsylnmlr ekgidkryfd elahvldldf rypsitrdmd yvewladtmi 421 rvpvahtlda aniadrydpa aiknrlammt pqnariwyis pqephnktay fvdapyqvdk 481 iseqtfknwq qkaqgialsl pelnpyipdd ftlvkndkny vrpelivdka dlrvvyapsr 541 yfasepkadv svvlrnpqam dsarnqvlfa lndylagmal dqlsnqaavg gisfstnann 601 glmvtangyt qrlpqlflal legyfsydat eeqlaqaksw ytqmmdsaek gkayeqaimp 661 vqmisqvpyf srderrallp sitlkevmay rnalktgarp eflvignmse aqatslaqdv 721 qkqlaangsa wcrnkdvvve kkqsvifeka gsstdsalaa vfvpvgydey vsaaysamlg 781 qivqpwfynq lrteeqlgya vfafpmsvgr qwgmgfllqs ndkqpsylwq ryqaffpdae 841 aklramkpee faqiqqaiit qmrqapqtlg eeasrlskdf drgnmrfdsr dkiiaqikll 901 tpqkladffh qavvepqgma ilsqiagsqn gkaeyvhptg wkvwdnvsal qqtlplmsek 961 ne