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LOCUS NP_461701 1217 aa linear CON 08-SEP-2022 enterica subsp. enterica serovar Typhimurium str. LT2]. ACCESSION NP_461701 VERSION NP_461701.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1217) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1217) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1217) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1217) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21660. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1217 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1217 /product="putative ATP binding cassette (ABC) transporter" /calculated_mol_wt=131534 Region 8..577 /region_name="MdlB" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; COG1132" /db_xref="CDD:440747" Region 639..1202 /region_name="MdlB" /note="ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]; COG1132" /db_xref="CDD:440747" CDS 1..1217 /gene="iroC" /locus_tag="STM2774" /coded_by="NC_003197.2:2917577..2921230" /note="similar to E. coli ATP-binding transport protein; multicopy suppressor of htrB (AAC74000.1); Blastp hit to AAC74000.1 (582 aa), 26% identity in aa 14 - 582, 29% identity in aa 34 - 565" /transl_table=11 /db_xref="GeneID:1254297" CONTIG join(WP_001111809.1:1..1217) ORIGIN 1 mpathspmpa rawivrlarv cwerktlsii vivasvstil laaltplitr qavndaiagd 61 tthlpllacg lllialfdfi gnyvrrgyag elslwvqhtl rsrafdsiqk ldgagqdalr 121 tgqvisrtns dlqqvhtllq mcpvplavlt yyvagiavml wmspsmtliv icvlaalait 181 alrarrrvfa qtglasdrla hmtehmrevl eqisvvkscv aelretrwld gqsrqmvrvr 241 igaaisqamp gatmlalpvi gqivllcygg wsvmngridl gtfvafasfl amltgptrvl 301 asflviaqrt qasvervfal idtrsrmedg tesvegqiig ldvekmsfhy dngnrilnei 361 sfsihagetv avvgasgsgk stllmllarf ydptsggvwl nttagqqnir dlkltalrrr 421 vgvvfedafl fagtvaenia yghpqatqdd irraadaaga sgfinalpqg fntrlaergs 481 nlsggqrqri alaralitap ellilddtts avdagteaei ntalgryadn ehmllviarr 541 rstlqladri vvldkgrvvd igtqaeldar cptfrslmsg egdflalapa eqrtlwpttq 601 avksddaher qtpagkgfvd rmtrvperav qmalaghgrq vsslltpvaw mfviaallia 661 ldsaagvgvl vllqrgidsg vaagdmstig icallalclv aigwccyalq tifaaraaes 721 vqhtvrlrsf shllrlslpw hekhidsrlt rmtvdvdsla rflqnglasa atsivtmvai 781 aaamfwldpi laltalsavp vvmlatwiyr rlsspayaqa rleigkvnst lqekvsgmrv 841 vqshgqqqqe aarlralsdn fratrvraqk ylavyfpflt fcteaayaav lligasrvag 901 gemtpgilaa fflllgqfyg pvqqlsgivd swqqatasgk hinallatee teniepssit 961 pgtgalrlea ltflypektq pvldnlslii ppgtvvavvg rsgagkstli kllaglyspg 1021 sgqirvgerl idaaslsdyr rqtglvtqdv alfsgdiaen iryprpdssd tevesaarra 1081 glfetvqhlp lgfrtpvnng gtdlsagqrq lialarahla qahillldea taridrsaee 1141 rlmtsltrvt htekrialiv ahrlttarrc dvivvidkgc iaeygsheql iaahglyarl 1201 wrnsigqtrd tqgevig