Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_461629 390 aa linear CON 08-SEP-2022 ACCESSION NP_461629 VERSION NP_461629.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella virus Fels2 ORGANISM Salmonella virus Fels2 Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Peduovirinae; P2virus. REFERENCE 1 (residues 1 to 390) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 390) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 390) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 390) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21588. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..390 /organism="Salmonella virus Fels2" /db_xref="taxon:194701" Protein 1..390 /product="Fels-2 prophage protein" /calculated_mol_wt=41923 Region 1..388 /region_name="FI" /note="major tail sheath protein; Provisional; PHA02560" /db_xref="CDD:164955" CDS 1..390 /locus_tag="STM2701" /coded_by="complement(NC_003197.2:2850113..2851285)" /note="similar to tail sheath proteins in phage P2" /transl_table=11 /db_xref="GeneID:1254224" CONTIG join(WP_000046109.1:1..390) ORIGIN 1 maqdyhhgvr vveinegtrp ittvstaivg mvctgddada svfplnkpvl ltdvltasgk 61 agesgtlars ldaiadqakp vtvvvrvaqg eteaettsni iggvtsdgkk tgmkallsaq 121 sqlgvkpril gvpghdtqav atellgvaqs lrgfaylaan gcktveeaia yrenfsqreg 181 mliwpdfinf dtvlkadata yasaralglr akideqigwh ktlsnvgvng vtgisadvfw 241 dlqdpatdag llnkndvttl irkdgfrfwg srclsddplf afenytrtaq vladtmaeah 301 mwavdgvlnp slardiiegl rakmrslvnq gyliggdcwl desvndkdtl kagkltidyd 361 ytpvpplenl mlrqritdry lvdfasrvaa