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LOCUS NP_461530 1031 aa linear CON 08-SEP-2022 ACCESSION NP_461530 VERSION NP_461530.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Phage Gifsy-1 ORGANISM Phage Gifsy-1 Viruses; unclassified bacterial viruses. REFERENCE 1 (residues 1 to 1031) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1031) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1031) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1031) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21489. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1031 /organism="Phage Gifsy-1" /db_xref="taxon:129861" Protein 1..1031 /product="Gifsy-1 prophage protein" /calculated_mol_wt=112049 Region <11..>503 /region_name="Smc" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; COG1196" /db_xref="CDD:440809" Region 229..426 /region_name="TMP_2" /note="Prophage tail length tape measure protein; pfam06791" /db_xref="CDD:429120" Region <486..>786 /region_name="sbcc" /note="exonuclease SbcC; TIGR00618" /db_xref="CDD:129705" Region 653..992 /region_name="tape_meas_lam_C" /note="phage tail tape measure protein, lambda family; TIGR01541" /db_xref="CDD:273681" CDS 1..1031 /locus_tag="STM2594" /coded_by="complement(NC_003197.2:2743187..2746282)" /note="similar to phage tail component H; lambda phage H tail component homolog (gi|2232364)" /transl_table=11 /db_xref="GeneID:1254117" CONTIG join(WP_000372072.1:1..1031) ORIGIN 1 mdqianlvid lsidsaefrn evprikklln daagdsersa armqrfldkq teatrrtsas 61 leqvtassta yssaveksaa astrlaadvd qtrqrvealg rklreeqaqs aavaaaqdrt 121 saafyrqids vkqlsgglqe lqriqaqvrq akgrgdisqg dylalvseta rktreltdae 181 alatqkkaqf irrlkeqttv qglsrtellr vkaaelgvss aadiyirkle rtgtathtlg 241 lksaaarrel gvlagelarg nfgalrgsgi tlanragwie qlmspkgmml gglaggvaaa 301 vyglgkayye gakesetfnk qliltgsyag kttgqlnama kslagngvtq hdaagvlaqv 361 vgsgaftgqa mamvsrtatr mqenvgqsvd etirqfkrlr ddpvnaakel drtlhfltat 421 qleqirvlge qgrvadaaki amsayseemn krmgdvhdnl gwierawnav gdaakwawdr 481 mldigredtl dekiatlqek iardrktpwt vsssqteydq qqlnelqeqk rqkdlldaka 541 qaernyqetq krrneqnaal nrdneteslr hqrevarita mqyadaavrn aalerenerh 601 kkalsqqakk pktyhndear rlllqysqqq aqtegqitaa klsttekmte ahkqllsfqq 661 riadlsgkkl tadeqsvlah kdeialalqk ldisqqdlqh qnalnelkkk tltltsqlad 721 eesrvrqqha malatmgmgd qqrgryeerl kiqqhyqeql eqlkrdskak gtygsdeyrq 781 aeqalkgsld rrlaewadyn akvdaaqgdw tlgasraldn flaqggnvag mtenvftnaf 841 ngmadsianf avtgkgsfrs ltvsiladla kmeariaask llgsvlamfg fgtsaggstp 901 sgayssaals vipnadggvy rsaglsqysg sivnrptffa fakgagvmge agpeailplr 961 rgadgklgvv aagsggmamf apeynieihn dagngqigpq alqavynigk kaaidfwqqq 1021 srdggiaggg r