putative anaerobic dimethylsulfoxide reductase [Salmonella enterica

LOCUS       NP_461465                801 aa            linear   CON 08-SEP-2022
            subsp. enterica serovar Typhimurium str. LT2].
ACCESSION   NP_461465
VERSION     NP_461465.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 801)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 801)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 801)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 801)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL21424.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..801
                     /product="putative anaerobic dimethylsulfoxide reductase"
                     /calculated_mol_wt=88626
     Region          24..801
                     /region_name="dmsA_ynfE"
                     /note="anaerobic dimethyl sulfoxide reductase, A subunit,
                     DmsA/YnfE family; TIGR02166"
                     /db_xref="CDD:274006"
     CDS             1..801
                     /locus_tag="STM2530"
                     /coded_by="complement(NC_003197.2:2662913..2665318)"
                     /note="similar to E. coli putative oxidoreductase, major
                     subunit (AAC74660.1); Blastp hit to AAC74660.1 (808 aa),
                     42% identity in aa 15 - 807"
                     /transl_table=11
                     /db_xref="GeneID:1254052"
CONTIG      join(WP_000508279.1:1..801)
ORIGIN      
        1 mgfyltsrim kniksqgnge qpaisrrhfi qassalialp fvsspataqa ravtatenrp
       61 aekvvqtcst fdcggkcdir ahvsdgivtr istrpdnald aqmpvmracv rgrayrkfvy
      121 hpdrlkypmk rvgkrgegkf eriswdeatt liadnlksit ekygpasryv hvgtavsggt
      181 fsgdkmarrl lnltggyles yhsvsmgnta aatpytygia asgssldtll dtklvilwgh
      241 nptetifght nyflqkmkqn gtrfivvdpr ysdtvsslad qwipllpttd nalmdammyv
      301 iisenlhdra fiaryaigfd edsmpegvpa neslvayltg akdgvvkspe waekithvpa
      361 qtirqlardy antkpaaliq gwgpqrhncg ertargstll atitgnvgik ggwaagyggc
      421 anrkfaagpe mpdnpvkaki svmnwvqaad daskvtpdmg lkdadkldsn irilfslagn
      481 ylanqnpdlh qavrvledes kiqfivasdl fmtpsakyad lllpetsfme rwnigetwgt
      541 asylilsekl iepeferrsd ydwlrevaak lgienefsqg rdekawiehi weqtrlampd
      601 enlpdfatlq ktrqhlfksa pfiafednir dpenhpfptp sgkieifskr lydmqhpeip
      661 alshyvpahe gpedalakdf plqlitwkgk nranstqyan pwlievqqqt lwinpqdaqk
      721 rgithgdmvr ihnsrgicei paevtpriip gvvamqagaw wqpdengvdk ggcanvlssa
      781 ritalakgns hqtmlvevak a