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LOCUS NP_461436 688 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_461436 VERSION NP_461436.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 688) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 688) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 688) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 688) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21395. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..688 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..688 /product="polyphosphate kinase" /EC_number="2.7.4.1" /calculated_mol_wt=80326 Region 7..680 /region_name="poly_P_kin" /note="polyphosphate kinase 1; TIGR03705" /db_xref="CDD:274734" CDS 1..688 /gene="ppk" /locus_tag="STM2501" /coded_by="NC_003197.2:2614936..2617002" /note="component of RNA degradosome; similar to E. coli polyphosphate kinase (AAC75554.1); Blastp hit to AAC75554.1 (688 aa), 96% identity in aa 1 - 688" /transl_table=11 /db_xref="GeneID:1254023" CONTIG join(WP_000529555.1:1..688) ORIGIN 1 mgqeklyiek elswlafner vlqeaadksn pliermrflg iysnnldefy kvrfaelkrr 61 iiiseeqgsn shsrhllgki qsrvlkadqe fdglynelll emarnqifli nerqlsvnqq 121 swlrhyfkhy lrqhitpili nretdlvqfl kddytylave iirgdtinya lleipsdkvp 181 rfvnlppetp rrrkpmilld nilryclddi fkgffdydal naysmkmtrd aeydlvheme 241 sslmelmsss lkqrltaepv rfvyqrdmpa alvdvlrekl tisrydsivp ggryhnfkdf 301 infpnvgkan lvnkplprlr hlwfdkekfr ngfdairerd vllyypyhtf ehvlellrqa 361 sfdpsvlaik iniyrvakds riidsmihaa hngkkvtvvv elqarfdeea nihwakrlte 421 agvhvifsap glkihaklfl isrkegddvv ryahigtgnf nektarlytd yslltadari 481 tnevrrvfnf ienpyrpvtf dylmvspqns rrllyemidr eianaqqglp sgitlklnnl 541 vdkglvdrly aasgsgvqvn llvrgmcsli pqlegisdni raisivdryl ehdrvyifen 601 ggdkqvwlss adwmtrnidy rievatpild prlkqrvldi idilfsdtvk arfidkelsn 661 ryvprgnrrk vqaqlaiydy iksleqpd