Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_461414 653 aa linear CON 08-SEP-2022 serovar Typhimurium str. LT2]. ACCESSION NP_461414 VERSION NP_461414.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 653) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 653) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 653) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 653) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21373. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..653 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..653 /product="putative oxidoreductase" /calculated_mol_wt=71288 Region 1..653 /region_name="PRK12769" /note="putative oxidoreductase Fe-S binding subunit; Reviewed" /db_xref="CDD:183733" CDS 1..653 /gene="aegA" /locus_tag="STM2479" /coded_by="complement(NC_003197.2:2589614..2591575)" /note="similar to E. coli putative oxidoreductase, Fe-S subunit (AAC75521.1); Blastp hit to AAC75521.1 (659 aa), 85% identity in aa 1 - 651" /transl_table=11 /db_xref="GeneID:1254001" CONTIG join(WP_001078938.1:1..653) ORIGIN 1 mnrfimansq qclgchacev acvmahnder hvltsqryqp ritvikhqhq rsavtchhce 61 dapcarscpn gaiahindsv qvnaqkcigc kscvvacpfg tmqmvltpva pnqfkasahk 121 cdlcqgreqg pacvencpad alqlvtedsl trlaktrrlr tarqeirpwh tvdtqhsgaa 181 sskaermqat pprgepdkla iearkttfee iylpfraaqa ereasrcltc gehsicewtc 241 plhnhipqwi elvkagdida avelshqtnc lpeitgrvcp qdrlcegact lrdeygavti 301 gnieryisdr alskgwrpdl sdvqksdkrv aiigagpagl acadvlarhg vsatvydrhp 361 eigglltfgi pafkldksll arrreifsam girfelncev gkdisletll esydavfvgv 421 gtyrsmkadl pnedapgvyd alpfliantk qvmglpalpd epfidtagln vvvlgggdta 481 mdcvrtalrh gaanvtcayr rdeanmpgsk kevknareeg anfefnvqpv elvldthgra 541 sgirflrtrl gepdgqgrrr pvpvpdsefv mpadavimaf gfhphgmswl eshgvkvdnw 601 griaasvese fryqtsnpki faggdavrga dlvvtamaeg rhaaqgildw lak