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LOCUS NP_461213 948 aa linear CON 08-SEP-2022 RcsB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. ACCESSION NP_461213 VERSION NP_461213.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 948) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 948) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 948) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 948) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21172. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..948 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..948 /product="sensory histidine kinase in two-component regulatory system with RcsB" /EC_number="2.7.3.-" /calculated_mol_wt=106149 Region 31..947 /region_name="PRK10841" /note="two-component system sensor histidine kinase RcsC" /db_xref="CDD:182772" CDS 1..948 /gene="rcsC" /locus_tag="STM2271" /coded_by="complement(NC_003197.2:2370746..2373592)" /note="regulates colanic capsule biosynthesis; similar to E. coli sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB (AAC75278.1); Blastp hit to AAC75278.1 (933 aa), 89% identity in aa 1 - 931" /transl_table=11 /db_xref="GeneID:1253793" CONTIG join(WP_000876078.1:1..948) ORIGIN 1 mkylasfrtt lkvsrylfra lalliwllia fvsvfyivna lhqreseirq efnlssdqaq 61 rfiqrtsdvm kelkyiaenr ltaengvmss rarddkmvvp dfeplfadsd caamgsawrg 121 sleslawfmr ywrdnfsaay dlnrvfligs dnlcmanfgl rempverdda lkalherimk 181 yrnapqeesg nnlfwisqga rqgvgyfyal tpvylanrlq allgveqsir menfftpgsl 241 pmgvtiiden ghslisltgp dgiikaeprw mqerswfgyt pgfrelvlkk slppsslsiv 301 ysvpvdlvle rirililnai llnvlvgagl ftlarmyerr ifipaesdaq rleeheqfnr 361 kivasapvgi cilrtidgvn ilsnelahty lnmlthedrq rltqiicgqq vnfvdvltsn 421 ntnlqisfvh sryrnenvai cvlvdvstrv kmeeslqema qaaeqasqsk smflatvshe 481 lrtplygiig nldllqtkel pkgverlvta mnnssslllk iisdildfsk ieseqlkiep 541 refsprevmn hitanylplv vrkqlglycf iepdvpvsln gdpmrlqqvi snllsnaikf 601 tdigcivlhv rcdgdylsir vrdtgvgipa kevvrlfdpf fqvgtgvqrn fqgtglglai 661 ceklismmdg disvdsepgm gsqftlripl ygaqypvkks veglagtccw lavrntslcq 721 fietslarsg vhtqryegqe paaddilivd dalehtwqgr aavvfcrrhi giplerapge 781 wvhsvasvhe lpallariys ieldsealss alpttdktad snddmmilvv ddhpinrrll 841 adqlgslgyq cktandgvda lnvlsknaid ivlsdvnmpn mdgyrltqri rqlgltlpvv 901 gvtanalaee kqrclesgmd sclskpvtld vlkqtlavya ervrktra