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LOCUS NP_461073 1026 aa linear CON 08-SEP-2022 serovar Typhimurium str. LT2]. ACCESSION NP_461073 VERSION NP_461073.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1026) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1026) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1026) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1026) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21032. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1026 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1026 /product="putative resistance protein" /calculated_mol_wt=110834 Region 1..1025 /region_name="PRK10614" /note="multidrug efflux system subunit MdtC; Provisional" /db_xref="CDD:182589" CDS 1..1026 /gene="yegO" /locus_tag="STM2128" /coded_by="NC_003197.2:2218646..2221726" /note="efflux transporter; outer membrane; similar to E. coli orf, hypothetical protein (AAC75137.1); Blastp hit to AAC75137.1 (1025 aa), 91% identity in aa 1 - 1025" /transl_table=11 /db_xref="GeneID:1253649" CONTIG join(WP_001210077.1:1..1026) ORIGIN 1 mrffalfiyr pvatiliaaa itlcgilgfr llpvaplpqv dfpvimvsas lpgaspetma 61 ssvatplers lgriagvnem tsssslgstr iilefnfdrd ingaardvqa ainaaqsllp 121 ggmpsrptyr kanpsdapim iltltsesws qgklydfast qlaqtiaqid gvgdvdvggs 181 slpavrvgln pqalfnqgvs ldevreaids anvrrpqgai edsvhrwqiq tndelktaae 241 yqpliihynn gaavrlgdva svtdsvqdvr nagmtnakpa illmirklpe aniiqtvdgi 301 raklpelram ipaaidlqia qdrsptiras lqeveetlai svalvilvvf lflrsgratl 361 ipavavpvsl igtfaamylc gfslnnlslm altiatgfvv ddaivvleni arhleagmkp 421 lqaalqgtre vgftvismsl slvavflpll lmgglpgrll refavtlsva igislvvslt 481 ltpmmcgwml ksskprtqpr krgvgrllva lqqgygtslk wvlnhtrlvg vvflgtvaln 541 iwlyiaipkt ffpeqdtgvl mggiqadqsi sfqamrgklq dfmkiirddp avnnvtgftg 601 gsrvnsgmmf itlkprgerk etaqqiidrl rvklakepga rlflmavqdi rvggrqanas 661 yqytllsdsl aalrewepki rkalsalpql advnsdqqdn gaemnliydr dtmsrlgidv 721 qaansllnna fgqrqistiy qpmnqykvvm evdprysqdi salekmfvin rdgkaiplsy 781 faqwrpanap lsvnhqglsa astiafnlpt gtslsqatea inrtmtqlgv pstvrgsfsg 841 taqvfqqtmn sqlilivaai atvyivlgil yesyvhplti lstlpsagvg allalelfna 901 pfslialigi mlligivkkn aimmvdfale aqrsggltpe qaifqacllr frpimmttla 961 alfgalplvl sggdgselrq plgitivggl vmsqlltlyt tpvvylffdr lrlrfsrkns 1021 kpvvei