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LOCUS NP_461072 1040 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_461072 VERSION NP_461072.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1040) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1040) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1040) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1040) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL21031. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1040 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1040 /product="putative outer membrane receptor" /calculated_mol_wt=111857 Region 1..1040 /region_name="PRK10503" /note="MdtB/MuxB family multidrug efflux RND transporter permease subunit" /db_xref="CDD:182501" CDS 1..1040 /gene="yegN" /locus_tag="STM2127" /coded_by="NC_003197.2:2215523..2218645" /note="similar to E. coli orf, hypothetical protein (AAC75136.1); Blastp hit to AAC75136.1 (1040 aa), 91% identity in aa 1 - 1040" /transl_table=11 /db_xref="GeneID:1253648" CONTIG join(WP_001197805.1:1..1040) ORIGIN 1 mqvlppgstg gpsrlfilrp vattllmaai llagiigyrf lpvaalpevd yptiqvvtly 61 pgaspdvmts avtaplerqf gqmsglkqms sqssggasvv tlqfqltlpl dvaeqevqaa 121 inaatnllps dlpnppiysk vnpadppimt lavtsnsmpm tqvedmvetr vaqkisqvsg 181 vglvtlaggq rpavrvklna qavaalglts etvrtaitga nvnsakgsld gperavtlsa 241 ndqmqsadey rrliiayqng apvrlgdvat veqgaenswl gawanqapai vmnvqrqpga 301 niiatadsir qmlpqltesl pksvkvtvls drttnirasv rdtqfelmla ialvvmiiyl 361 flrnipatii pgvavplsli gtfavmvfld fsinnltlma ltiatgfvvd daivvienis 421 ryiekgekpl aaalkgagei gftiisltfs liavlipllf mgdivgrlfr efavtlavai 481 lisavvsltl tpmmcarmls qqslrkqnrf sracermfdr viasygrgla kvlnhpwltl 541 svafatllls vmlwivipkg ffpvqdngii qgtlqapqss syasmaqrqr qvaerilqdp 601 avqslttfvg vdganptlns arlqinlkpl darddrvqqv isrlqtavat ipgvelylqp 661 tqdltidtqv srtqyqftlq attldalshw vpklqnalqs lpqlsevssd wqdrglaawv 721 nvdrdsasrl gismadvdna lynafgqrli stiytqanqy rvvlehntas mpglaaleti 781 rltsrdggtv plsaiarieq rfaplsinhl dqfpvttfsf nvpesyslgd avqaildtek 841 tlalpaditt qfqgstlafq aalgstvwli vaavvamyiv lgvlyesfih pitilstlpt 901 agvgallali iagseldiia iigiilligi vkknaimmid falaaereqg msprdaifqa 961 cllrfrpilm ttlaallgal plmlstgvgt elrrplgiam vggllvsqvl tlfttpviyl 1021 lfdrlslyvk srfprhkeea