putative inner membrane protein [Salmonella enterica subsp.

LOCUS       NP_460784                519 aa            linear   CON 08-SEP-2022
            enterica serovar Typhimurium str. LT2].
ACCESSION   NP_460784
VERSION     NP_460784.2
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 519)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 519)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 519)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 519)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL20743.
            
            On Dec 2, 2016 this sequence version replaced NP_460784.1.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..519
                     /product="putative inner membrane protein"
                     /calculated_mol_wt=56372
     Region          1..224
                     /region_name="TerC"
                     /note="Tellurite resistance membrane protein TerC
                     [Inorganic ion transport and metabolism]; COG0861"
                     /db_xref="CDD:440622"
     Region          145..518
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
     CDS             1..519
                     /gene="yoaE"
                     /locus_tag="STM1828"
                     /coded_by="complement(NC_003197.2:1926498..1928057)"
                     /note="similar to E. coli putative transport protein
                     (AAC74886.1); Blastp hit to AAC74886.1 (518 aa), 90%
                     identity in aa 1 - 518"
                     /transl_table=11
                     /db_xref="GeneID:1253347"
CONTIG      join(WP_000421815.1:1..519)
ORIGIN      
        1 mellmdpsiw vglltlvvle ivlgidnlvf iailadklpp kqrdkarlig lslalimrla
       61 llsiiswlvt ltkplftvwd ftfsgrdlim llggifllfk attelherle nrehdtghgk
      121 gyasfwvvvt qivildavfs ldavitavgm vnhlpvmmaa vviamavmll askpltrfvn
      181 qhptvvvlcl sfllmiglsl vaegfgfhip kgylyaaigf sivievfnqi arrnfirhqs
      241 tlplrartad ailrlmggkr qastqhetds paaisvsega faeeerymin gvltlasrsl
      301 rgimtprgei swvdanlsva eirqqllssp hslfpvcrge ldeiigivra kellvaleeg
      361 advaaiaass paivvpetld pinllgvlrr argsfvivtn efgvvqglvt pldvleaiag
      421 efpdadetpe ivadaegwiv kggtdlhalq qalevdhlvn eegdiatvag lviaanghip
      481 rvgdvidvpp lritiveand yrvdlvrivk eqpahdeee