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LOCUS NP_460553 993 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_460553 VERSION NP_460553.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 993) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 993) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 993) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 993) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL20512. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..993 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..993 /product="ssrAB activated gene" /calculated_mol_wt=110781 Region 1..993 /region_name="SrfB" /note="Virulence factor SrfB-related protein [Secondary metabolites biosynthesis, transport and catabolism]; COG4457" /db_xref="CDD:443555" CDS 1..993 /gene="srfB" /locus_tag="STM1594" /coded_by="NC_003197.2:1681089..1684070" /note="SrfB (gi|8347259)" /transl_table=11 /db_xref="GeneID:1253112" CONTIG join(WP_000960833.1:1..993) ORIGIN 1 mlvnlcdykq svtliansgv qfldfgltpq esahygrfvr ktangpllrl dfdltsgryt 61 lpgraggqpe vvkpestqtl hysldvldgi wlplpflrfn pprtfidgpd nwariqvrkl 121 sepdsagnth ritlafdsql aknmpaalap cendllngtr falawrdeev adfldqtwid 181 gwlresflqy asqvenrseq aiqqalrsfe yqahwlnllt llgeqltvpe vkfvthtlst 241 paipvdlild vgnthtcgvl iedhgdandg lrqtaelqvr slsepqylnd plftsrvefs 301 earfgkqhfs vesgrddafv wpsivrvgde aralamqrvg tegssgissp rrylwdetpa 361 lqdwrfsqih gktqreplat afplmnlmnd dgqplfrlpy eerlpvfspq ysrstlmthm 421 lceilaqalg qinsvatrlr lgfpasprql rtliltlpsa mpkqereifr qrmfealalv 481 wkamgwhpqd edfttpkqre ksvvpvpeiq mewdeascgq lvwlyneais hyagrtesff 541 nalarpdrqp epgvvpgral rvasidiggg ttdmaivhyq lddgvganvk itphllfreg 601 fkvagddlll diiqrcvlps lqtalqragv tdaaallatl fgdsgridtq ailrqqtalq 661 lfmplghavl saweqsdind pfaglhatfg dllirrptsn vmnyiqqaid halpsgsptf 721 difnvplqiq fsqlqeslla gqftlttplh avceaishyh cdillvtgrp tclpgvqali 781 rhlqpvpvnr ivwmdkyqvh ewypfsqqgr ignpkstaav gamlcslald lrlprfnfka 841 adigaystvr ylgvldntvn tlrdeniwyh eidldkpgat ldarlhfplr gnvtlgfrql 901 ansrwpatpl yclsinsael aktiagdgvl nvrlklrgss kdsapesfil sdawlqdgtp 961 vaadaltlkl ntladrrhsg shywidsgsv ylk