putative inner membrane protein [Salmonella enterica subsp.

LOCUS       NP_460404                679 aa            linear   CON 08-SEP-2022
            enterica serovar Typhimurium str. LT2].
ACCESSION   NP_460404
VERSION     NP_460404.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 679)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 679)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 679)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 679)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL20363.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..679
                     /product="putative inner membrane protein"
                     /calculated_mol_wt=76343
     Region          21..664
                     /region_name="FUSC"
                     /note="Fusaric acid resistance protein family; pfam04632"
                     /db_xref="CDD:428044"
     CDS             1..679
                     /locus_tag="STM1441"
                     /coded_by="complement(NC_003197.2:1516538..1518577)"
                     /note="similar to E. coli orf, hypothetical protein
                     (AAC74717.1); Blastp hit to AAC74717.1 (670 aa), 84%
                     identity in aa 1 - 669"
                     /transl_table=11
                     /db_xref="GeneID:1252959"
CONTIG      join(WP_000777608.1:1..679)
ORIGIN      
        1 mklslpalrn tpwfkatsgq wryalrntia mclaltfayy lnldepywam tsaavvsfpt
       61 vggviskslg riagsllgat aaliiaghtl nepwlflfsm aawigfctwa cahftnnaay
      121 afqlsgytaa iiafpmvniv eitqlwdiaq arvcevivgi lcggmmmmil pstsdgtall
      181 tafknmharl lehasllwqp ettdairsah egvigqiltm nllriqafws hyrfrrqnal
      241 lnallhqqlr ltsvisslrr mllnwptppe nsrevieqll aelakprads ytvaqiiapl
      301 rpqdeqdyrh lafwqrlryf cqlylrssrq lyliesgapv dqihirrtpg larhtdnaea
      361 iwsgvrtfct ltvigawsig aqwesgpgal tlaaiscvly sivatpfksl sllmrtlvll
      421 slfsfvvkfg lmvqitdlwq fllflfplfv tmqllklqmp klaglwgqli vfmgsfiavt
      481 nppvydfadf lndntakivg vaiswlafai lrpgsdavks rrhiralrrd fvdqlsrhps
      541 hnesefeslt yhhvsqlsns qdalarrwll rwgvvllncs hvvwqlrawe srsdplsrvr
      601 dicisllrdv msergvqqrp lavtlqelqr icdtlahhhq paahelaaii wrlhcslsql
      661 eqapaqgtla pgylmtpqa