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PTS family sugar specific enzyme II for cellobiose, arbutin, and


LOCUS       NP_460279                452 aa            linear   CON 08-SEP-2022
            salicin [Salmonella enterica subsp. enterica serovar Typhimurium
            str. LT2].
ACCESSION   NP_460279
VERSION     NP_460279.1
DBLINK      BioProject: PRJNA57799
            BioSample: SAMN02604315
DBSOURCE    REFSEQ: accession NC_003197.2
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 452)
  AUTHORS   McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W.,
            Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F.,
            Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A.,
            Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W.,
            Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K.
  TITLE     Complete genome sequence of Salmonella enterica serovar Typhimurium
            LT2
  JOURNAL   Nature 413 (6858), 852-856 (2001)
   PUBMED   11677609
REFERENCE   2  (residues 1 to 452)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 452)
  AUTHORS   McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R.,
            SanMiguel,P. and Csonka,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2016) Department of Microbiology and Molecular
            Genetics, University of California, Irvine, CA 92697, USA
  REMARK    Sequence update by submitter
REFERENCE   4  (residues 1 to 452)
  CONSRTM   The Salmonella typhimurium Genome Sequencing Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2001) Genome Sequencing Center, Department of
            Genetics, Washington University School of Medicine, 4444 Forest
            Park Boulevard, St. Louis, MO 63108, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AAL20238.
            Supported by NIH grant 5U 01 AI43283
            
            Coding sequences below are predicted from manually evaluated
            computer analysis, using similarity information and the programs;
            GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and
            GeneMark; http://opal.biology.gatech.edu/GeneMark/
            
            EC numbers were kindly provided by Junko Yabuzaki and the Kyoto
            Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/,
            and Pedro Romero and Peter Karp at EcoCyc;
            http://ecocyc.PangeaSystems.com/ecocyc/
            
            The analyses of ribosome binding sites and promoter binding sites
            were kindly provided by Heladia Salgado, Julio Collado-Vides and
            ReguonDB;
            http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset
            
            This sequence was finished as follows unless otherwise noted: all
            regions were double stranded, sequenced with an alternate
            chemistries or covered by high quality data (i.e., phred quality >=
            30); an attempt was made to resolve all sequencing problems, such
            as compressions and repeats; all regions were covered by sequence
            from more than one m13 subclone.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium str. LT2"
                     /strain="LT2"
                     /serovar="Typhimurium"
                     /sub_species="enterica"
                     /culture_collection="ATCC:700720"
                     /culture_collection="SGSC:1412"
                     /type_material="type strain of Salmonella enterica"
                     /db_xref="taxon:99287"
                     /focus
     Protein         1..452
                     /product="PTS family sugar specific enzyme II for
                     cellobiose, arbutin, and salicin"
                     /calculated_mol_wt=48327
     Region          1..452
                     /region_name="PRK10297"
                     /note="PTS system N,N'-diacetylchitobiose-specific
                     transporter subunit IIC; Provisional"
                     /db_xref="CDD:182363"
     CDS             1..452
                     /gene="celB"
                     /locus_tag="STM1313"
                     /coded_by="NC_003197.2:1392201..1393559"
                     /note="similar to E. coli PEP-dependent phosphotransferase
                     enzyme II for cellobiose, arbutin, and salicin
                     (AAC74807.1); Blastp hit to AAC74807.1 (452 aa), 94%
                     identity in aa 1 - 452"
                     /transl_table=11
                     /db_xref="GeneID:1252831"
CONTIG      join(WP_000073064.1:1..452)
ORIGIN      
        1 msnviaslek vllpfavkig kqphvnaikn gfirlmpltl agamfvlinn vflsfgegsf
       61 fysmgirlda stietlnglk giggnvyngt lgimslmapf figmalaeer kvdalaagll
      121 svaafmtvtp ysvgeayavg anwlgganii sgiiiglvva emftfivrrn wviklpdsvp
      181 asvsrsfsal ipgfiilsim giiswalsny gsnfhqiimd tistplaslg svvgwayvif
      241 vpllwffgih gslaltalds gimtpwalen isiyqqygsv daaleagktf hiwakpmlds
      301 yiflggsgat lgliiaifla srradyrqva klalpsgifq inepilfglp iimnpvmfip
      361 filvqpilaa itlvayylgi ippitniapw tmptglgaff ntngsvaall valfnlavat
      421 liylpfvvva nkaqnaieqe eseedianal kf