Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS NP_459936 1351 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_459936 VERSION NP_459936.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1351) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1351) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1351) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1351) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19895. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1351 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1351 /product="cell division protein" /calculated_mol_wt=148172 Region 1..1351 /region_name="PRK10263" /note="DNA translocase FtsK; Provisional" /db_xref="CDD:236669" CDS 1..1351 /gene="ftsK" /locus_tag="STM0960" /coded_by="NC_003197.2:1037374..1041429" /note="required for cell division and chromosome partitioning; similar to E. coli cell division protein (AAC73976.1); Blastp hit to AAC73976.1 (1329 aa), 63% identity in aa 263 - 843" /transl_table=11 /db_xref="GeneID:1252479" CONTIG join(WP_001542260.1:1..1351) ORIGIN 1 msqeytedkd vtltklssgr rlleallili alfavwlmaa llsfnpsdps wsqtawhepi 61 hnlggapgaw ladtlffifg vmaytipvii vggcwfawrh qstddyidyf avslrligvl 121 aliltscgla ainaddiwyf asggvigsll sttlqpllhs sggtimllci waagltlftg 181 wswvsiaekl ggwllniltf asnrtrrddt wvddeeydde ydeetdgvqr esrrarilrg 241 alarrkrlae kfsnprgrqt daalfsgkrm dddediqysa rgvaadpddv lfsgnratqp 301 eydeydplln ghsvtepvaa aaaatavtqt waasadpimq tppmpgaepv vaqptvewqp 361 vpgpqtgepv iapapegyqp hpqyaqpqea qsapwqqpvp vasapqyaat pataaeydsl 421 apqetqpqwq pepthqptpv yqpepiaaep shmpppvieq pvatepepdt eetrparppl 481 yyfeeveekr arereqlaaw yqpipepvke nvpvkptvsv apsippveav aaaasldagi 541 ksgalaagaa aaapafslat ggaprpqvke gigpqlprpn rvrvptrrel asygiklpsq 601 riaeekarea ernqyetgaq ltdeeidamh qdelarqfaq sqqhrygety qhdtqqaedd 661 dtaaeaelar qfaasqqqry sgeqpagaqp fslddldfsp mkvlvdegph eplftpgvmp 721 estpvqqpva pqpqpqyqqp qqpvapqpqy qqpqqpvapq pqyqqpqqpv apqpqyqqpq 781 qpvapqpqyq qpqqpvapqp qyqqpqqpva pqpqyqqpqq pvapqpqyqq pqqptapqds 841 lihpllmrng dsrplqrptt plpsldlltp ppsevepvdt faleqmarlv earladfrik 901 advvnyspgp vitrfelnla pgvkaarisn lsrdlarsls tvavrvvevi pgkpyvglel 961 pnkkrqtvyl revldnakfr enpspltvvl gkdiagdpvv adlakmphll vagttgsgks 1021 vgvnamilsm lykaqpedvr fimidpkmle lsvyegiphl ltevvtdmkd aanalrwsvn 1081 emerryklms algvrnlagy nekiaeaarm grpipdpywk pgdsmdvqhp vleklpyivv 1141 lvdefadlmm tvgkkveeli arlaqkaraa gihlvlatqr psvdvitgli kaniptriaf 1201 tvsskidsrt ildqggaesl lgmgdmlysg pnstmpvrvh gafvrdqevh avvqdwkarg 1261 rpqyvdgits dseseggggg fdggeeldal fdqavnfvtq krkasisgvq rqfrigynra 1321 ariieqmeaq givsaqghng nrevlapppf e