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LOCUS NP_459563 909 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_459563 VERSION NP_459563.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 909) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 909) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 909) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 909) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19522. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..909 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..909 /product="putative inner membrane protein" /calculated_mol_wt=101959 Region 1..824 /region_name="PspF" /note="Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; COG1221" /db_xref="CDD:440834" Region 814..901 /region_name="PRD" /note="PRD domain; pfam00874" /db_xref="CDD:459973" CDS 1..909 /locus_tag="STM0571" /coded_by="NC_003197.2:629333..632062" /note="unknown (gi|2896134)" /transl_table=11 /db_xref="GeneID:1252091" CONTIG join(WP_001031460.1:1..909) ORIGIN 1 mnkesifrql elrlagcslt adalgafsam aiadslrqkr siishhlnnl hreqrvvkvn 61 srpvlflpve alrrhhrlav rqgdyasiqa lcaerqdsle lligaqgslq eslrqckaai 121 sypgaglpll lrgptgtgks flarqlwqya ieqgilppea pftvfncaey annpelltsk 181 lfghakgaft gadravsgli etsnggvlfi devhrlppeg qeklfhfmdn gtwrrlgess 241 dersatvrli fastedlekh flatfirrip vivkilpiae rgqyerlafi hhffrreaqr 301 lhhdlsldse iisqlmqetl egnvgglenl irnicasawt fgqrddgvle vkagqlpdrl 361 lmevpftvpq taerimiyre ggvfprvsgq hqeylrlten icglceelaq enisartfdk 421 lvyqnltlyl dalmnkespr arqdkrlrfi edvgkaiaah ydlelnaefa yltgryltsl 481 pltpveasps vrhvmlrwle eapglaqrva qklldvvnnk ydllidtldr lvvaaivsna 541 idatsggkvk aliiahgyst assiagvanr ligekiyham dmpmevafsd vsraivdylq 601 htdtragvmv lidmgytkei adallsvihg plvvvdnvtt rlalnvasei alqknieqia 661 eeivplnqsr wdvfwpaqkk arallvtcit gigtafkfkn lmeksqltdf diniiaceyt 721 rlknsrmaas llnqyeviav vgtidpqlag vpwvgieell geqgyahlsq llsgylndkq 781 ialinknmvr efslhnvvns ltilnankti ghietiiaew qstlgfsfnn nliislyvhl 841 scmierlvmr neithyknmt efnerhgefi amvnhsfqrl kilynvalpv aeigyihdif 901 elriedfhw