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LOCUS NP_459503 804 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_459503 VERSION NP_459503.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 804) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 804) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 804) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 804) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19462. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..804 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..804 /product="putative inner membrane protein" /calculated_mol_wt=88642 Region 1..798 /region_name="YbbP" /note="Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism]; COG3127" /db_xref="CDD:442361" CDS 1..804 /gene="ybbP" /locus_tag="STM0508" /coded_by="NC_003197.2:567125..569539" /note="similar to E. coli putative oxidoreductase (AAC73598.1); Blastp hit to AAC73598.1 (804 aa), 88% identity in aa 1 - 804" /transl_table=11 /db_xref="GeneID:1252028" CONTIG join(WP_000561776.1:1..804) ORIGIN 1 miarwfwrew rspsliivwl alslavacvl algsisdrme kglsqqsref magdrtlqss 61 revpkawlee arkrglnvge qltfatmtfa gdtpqlasvk avdsvypmyg elqtrpggvk 121 aqpgsvllap rlmallnlkt gdtidvgdvt lriagevvqe pdsgfnpfqm aprlmmnmad 181 vaktgaiqpg srvmwrykfg gtpqqlagye swllpqlkpe hrwygleqdd galgkslers 241 qqflllsall tlllavaava vamshycrsr ydlvailktl gagraqlrkl iigqwlmvlg 301 lsavtggaig llfenillvl lkpvlpadlp paslwpwlwa lgamtvisll vglrpyrlll 361 atqplrvlrr dvvarvwplk iylpvacavv vallvglmgg smllwavlag avilallcgl 421 vgwmllnvlr gmtltslplr lavsrllrqp wstlsqlsaf slsfmllall lvlrgdlldr 481 wqqqlppesp nyfliniase qvaplkafla ehqvipqtfy pivrarltki ngnptegqqd 541 eslnrelnlt wqdtrpahnp lvaghwppkp gevsmeegla krlnvklgds vtfmgdtqaf 601 sakvtslrqv dweslrpnff fifpsgaldg qpqswltsfr wengngmltq lnrefptvsl 661 ldigailkqv gqvleqvsra levmvvlvtl cgmllllaqv qvgmrqrhqe lvvwrtlgag 721 kkllrttlwc efamlglvag lvaaigaeta lailqinvfd fpwepdwrlw galpfcgall 781 lsvcggwlgv rllkgkalfr qfsg