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LOCUS NP_459390 1046 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_459390 VERSION NP_459390.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1046) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1046) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1046) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1046) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19349. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1046 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1046 /product="ATP-dependent dsDNA exonuclease" /calculated_mol_wt=117694 Region 1..1046 /region_name="PRK10246" /note="exonuclease subunit SbcC; Provisional" /db_xref="CDD:182330" CDS 1..1046 /gene="sbcC" /locus_tag="STM0395" /coded_by="complement(NC_003197.2:446242..449382)" /note="similar to E. coli ATP-dependent dsDNA exonuclease (AAC73500.1); Blastp hit to AAC73500.1 (1048 aa), 70% identity in aa 1 - 1048" /transl_table=11 /db_xref="GeneID:1251914" CONTIG join(WP_001526312.1:1..1046) ORIGIN 1 mkilslrlkn lnslkgewkv dftaepfasn glfaitgptg agkttlldai clalyhetpr 61 lntvsqsqnd lmtrdtaecl aevefevkge awrafwsqnr arnqpdgnlq aprvelarcs 121 dgkifadkvk dklemiatlt gldygrftrs mllsqgqfaa flnakakera elleeltgte 181 iygqisaqvf ekhksarlel eklqaqasgv alladeqlqq leaslqaltd eekrlladqq 241 gqqqhlhwlt rknelhtelh arqqalyaaq earekaqpql aaltlaqpar qlrphweriq 301 eqtravervr qhsdevnarl qsayrlrqri racahrqftq lnatgqrlkt wlaehdgirv 361 wrselagwra lltqqshdra qlsqwqqqll sdtrqrdalp pltldltpqa laearalhtr 421 qrplrhrlaa lqgqilpkqk rqaqlqaaia rhhqeqaqyt qrladkrlsy ktkaqeladv 481 rticeqeari kdlesqrahl qsgqpcplcg stthpaiaay qalelsanqt rrdalekevk 541 tlaeegaalr gqldaltqql qrdeseaqsl lqeeqaltee wqtlcatlgv qlqpqedlag 601 wltaaeeheq qldqlsqrha lqtqiaahte qvarftaqia qrqasltadl aqytlslpap 661 edeaswlner adeakiwqqr qtefadlqmq idrlapllet lpqtdtadsd ddvpldnwrq 721 ahdecvslqs qlqtlqeqtt qeqqraaeai ahfdaalkns pfdsqatfla alldeetvtr 781 lekqqqtles qlqqakalsa qsaqaladhq qqppagldpt ctaeqlaqrl tqlaqqlren 841 ttrqgeirqq ikqdadnrqr qralmtemkq asqqvedwgy lnaligskeg dkfrkfaqgl 901 tldnlvwlan hqltrlhgry llqrkasdal elevvdtwqa davrdtrtls ggesflvsla 961 lalalsdlvs hktridslfl degfgtldse tldaaldald alnasgktig vishveamke 1021 ripvqikvkk inglgyskld kafave