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LOCUS NP_459353 990 aa linear CON 08-SEP-2022 serovar Typhimurium str. LT2]. ACCESSION NP_459353 VERSION NP_459353.3 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 990) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 990) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 990) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 990) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19312. On Dec 2, 2016 this sequence version replaced NP_459353.2. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..990 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..990 /product="DNA restriction (DNA helicase)" /calculated_mol_wt=113258 Region 2..988 /region_name="PRK15483" /note="type III restriction-modification system endonuclease" /db_xref="CDD:237972" CDS 1..990 /gene="res" /locus_tag="STM0358" /coded_by="NC_003197.2:405300..408272" /note="type iii restriction-modification system stylti enzyme res (SW:T3RE_SALTY)" /transl_table=11 /db_xref="GeneID:1251877" CONTIG join(WP_001651666.1:1..990) ORIGIN 1 mmnilleelp hqeqalaail asftgidhaq adhnhyanpl ikeryddkan idvkmetgtg 61 ktyvytrlmy elhqkyglfk fvlvvptpai kegarnfits dyarqhfsqf yentrmelct 121 inagdfkvks grknfpaqll sftdasrrds htiqvllina qmlnsasmtr ddydqtllgg 181 ltspvkglqm trpvviidep hrfardnkfy raiqaiqpqm ivrfgatfpd ivegkgknkc 241 vrkdyyrrqp qfdlnavdsf ndglvkgidi yypnlpeeqa nnryivdsvt akklilrrgs 301 kiaevgvgen ladvdagfeg sieyagskml sndleleagm alvpgtfgas yqeliiqdai 361 dkhfdteqan flrsnepenn apriktlslf fidsiksyrd degwlkvtfe rllkkkltql 421 iddyqrktlp reveylsflq atlaslhsdn qnvhagyfge drgsgdeaiq aevddilknk 481 ekllsfsdhh gnwetrrflf skwtlregwd npnvfviakl rssgsesski qevgrglrlp 541 vdenghrvhq eewpsrlsfl igydekafas mlvdeinrds kvqlneqkld eamitlivte 601 rqkvdpafte lrlledlddk klinrsnefk psvtlngetk sgfawllefy peltqarvra 661 drirdnkpas rlrvrlrken weqlssiweq fsrrymlqfe rsgasleqia aevlrdpaly 721 irqkpsqvqq rlvsnedngr fevaqregel aasefmagmk yghflkqlal rtslpvnvlh 781 pvlmamlrdv lhgdsrylse isldnmtral qtrinahfaq rhdylpldfq astsvfdsta 841 rqfreeisae ivgknvdena iddprslyqi pplrydsvdp elpllkydyp qqvsvfgklp 901 kraiqipkyt ggsttpdfvy rierqdadsv yllvetkaen mrvgdqvild aqrkffdmlr 961 rqninvefae atsapavfst ingliegkan