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LOCUS NP_459346 1055 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_459346 VERSION NP_459346.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 1055) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 1055) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 1055) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 1055) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19305. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..1055 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..1055 /product="putative cation efflux system protein" /calculated_mol_wt=113783 Region 1..1044 /region_name="AcrB" /note="Multidrug efflux pump subunit AcrB [Defense mechanisms]; COG0841" /db_xref="CDD:440603" CDS 1..1055 /locus_tag="STM0351" /coded_by="complement(NC_003197.2:393894..397061)" /note="similar to E. coli integral transmembrane protein; acridine resistance (AAC76298.1); Blastp hit to AAC76298.1 (1034 aa), 42% identity in aa 3 - 1030" /transl_table=11 /db_xref="GeneID:1251870" CONTIG join(WP_000673160.1:1..1055) ORIGIN 1 mkfthffiar pifaivlsll mllagaiafl klplseypav tpptvqvsas ypganpqvia 61 dtvaapleqv ingvdgmlym ntqmaidgrm visiafeqgt dpdmaqiqvq nrvsralprl 121 peevqrigvv tektspdmlm vvhlvspqkr ydslylsnfa irqvrdelar lpgvgdvlvw 181 gageyamrvw ldpakianrg ltasdivtal reqnvqvaag svgqqpeasa afqmtvntlg 241 rltseeqfge ivvkigadge vtrlrdvarv tlgadaytlr sllngeaapa lqiiqspgan 301 aidvsnairg kmdelqqnfp qdieyriayd ptvfvraslq svaitlleal vlvvlvvvmf 361 lqtwrasiip lvavpvslvg tfalmhlfgf slntlslfgl vlsigivvdd aivvvenver 421 hisqgkspge aakkamdevt gpilsitsvl tavfipsafl aglqgefyrq faltiaisti 481 lsainsltls palaaillrp hhdtakadwl trlmgtvtgg ffhrfnrffd sasnryvsav 541 rravrgsviv mvlyagfvgl twlgfhqvpn gfvpaqdkyy lvgiaqlpsg asldrteavv 601 kqmsaialae pgvesvvvfp glsvngpvnv pnsalmfaml kpfderedps lsanaiagkl 661 mhkfshipdg figifppppv pglgatggfk lqiedraelg feamtkvqse imskamqtpe 721 lanmlasfqt napqlqvdid rvkaksmgvs ltdifetlqi nlgslyvndf nrfgrawrvm 781 aqadapfrmq qedigllkvr nakgemipls afvtimrqsg pdriihyngf psvdisggpa 841 pgfssgqatd aiekivretl pegmvfewtd lvyqekqagn salaifalav llaflilaaq 901 ynswslpfav lliapmslls aivgvwvsgg dnniftqigf vvlvglaakn ailivefara 961 kehdgadplt avleasrlrl rpilmtsfaf iagvvplvla tgagaemrha mgiavfagml 1021 gvtlfglllt pvfyvvvrrm alkrenrvds hdqqa