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LOCUS NP_459333 853 aa linear CON 08-SEP-2022 serovar Typhimurium str. LT2]. ACCESSION NP_459333 VERSION NP_459333.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 853) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 853) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 853) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 853) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19292. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..853 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..853 /product="putative fimbriae; usher" /calculated_mol_wt=94316 Region 1..853 /region_name="PRK15248" /note="fimbrial outer membrane usher protein" /db_xref="CDD:185160" CDS 1..853 /gene="stbC" /locus_tag="STM0338" /coded_by="complement(NC_003197.2:381036..383597)" /note="similar to E. coli outer membrane protein; export and assembly of type 1 fimbriae, interrupted (AAC77273.1); Blastp hit to AAC77273.1 (878 aa), 30% identity in aa 30 - 870" /transl_table=11 /db_xref="GeneID:1251857" CONTIG join(WP_000075342.1:1..853) ORIGIN 1 msptinlnrk slalliaivc sgsaqgeeyy fdpallqgat ygqniarfne rqtpsgdyla 61 dvyvngtlvt sstnirfnav kegqqtepcl plsvmkaaqi kslpatdaat ecrplrewvp 121 hagwqfdsat lrllltipmt elthkprgyi spsewdsgal alflrhntnw thtentdshy 181 ryqylwsgln mgvnlglwqv rhqsnlryan snqsgsawry nsvrtwvqrp vasvnsilsl 241 gdsytdsslf gslsfngakl vtdermrpqg krgyapevrg vaassahvvv kqlgkviyet 301 nvppgpfyid dlyntryqgd levevieasg ktsrftvpys svpdsvrpgn whyslafgrv 361 rqyydienrf fegtfqhgvn ntitlnlgsr iaqryqawla ggvwatgmga fglnatwsna 421 raehndrqqg wraelsyskt fttgtnlvla ayrystngfr dlqdvlgvrr eaktgidyys 481 dtlhqrnrls atvsqplgrl gtlnlsasta dyynnqsrit qlqmgysnqw rnisygvnia 541 rqrttwdydr fyhgvnepld vssrqkytet tmsfnvsipl dwgenrtsva mnynqssqsr 601 sstvsmtgss gensdlswsv yggyeryrns nsdssapttf ggnlqqntrf galranydqg 661 dnyrqeglga sgtlvlhpgg ltagpytsdt falihadgaq gaivqngqga vvdrfgyail 721 pslspyrvnn vtldtrkmrs daeltggsqq ivpyagaiar vnfatisgka vlisvkmpdg 781 gippmgadvf ngegtnigmv gqsgqiyari ahpsgsllvr wgtganqrcr vayqldlhtk 841 epflylnkic eke