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LOCUS NP_459269 879 aa linear CON 08-SEP-2022 enterica serovar Typhimurium str. LT2]. ACCESSION NP_459269 VERSION NP_459269.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 879) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 879) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 879) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 879) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19228. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..879 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..879 /product="putative ATPase with chaperone activity" /name="homolog of Yersinia clpB" /calculated_mol_wt=95968 Region 14..867 /region_name="VI_ClpV1" /note="type VI secretion ATPase, ClpV1 family; TIGR03345" /db_xref="CDD:274528" CDS 1..879 /locus_tag="STM0272" /coded_by="NC_003197.2:311195..313834" /note="similar to E. coli ATP-binding component of serine protease (AAC73969.1); Blastp hit to AAC73969.1 (758 aa), 42% identity in aa 150 - 449, 40% identity in aa 421 - 685, 32% identity in aa 30 - 74" /transl_table=11 /db_xref="GeneID:1251790" CONTIG join(WP_000449778.1:1..879) ORIGIN 1 metpvsrsal ygklagplfr slesatafck lrsnpwvelt hwlhqltqqp dndilhvlrh 61 yqiplsdvek allrqldmlp agasaisdfs hhidlsveka wmlasvrygd nkirsgwlll 121 allttpelrr vlssicapla tlpvdeltei lpslietspe aqerpydgsg lasaipgess 181 qaipnggqdg ksalakycqd mtaqardgki dpvtgrehei rtmtdillrr rqnnplltge 241 agvgktavve gfalaiaqge vppalrevrl laldvgalla gasmkgefes rlkglleeag 301 rspqpvilfv devhtlvgag gasgtgdaan llkpalargt lrtigattws eykrhiekdp 361 altrrfqvlq iaepeeipam emvrglvdtl ekhhnvlild eavraavqls hryiparqlp 421 dkaislldta aarvaltlht ppasvqflrq qlkaaemers llqkqekmgi qsderrdalm 481 arifslnnel tasesrwqre lelvhtlqel rlaesdaddk ttlqqaetal rewqgdapvv 541 fpevsaavva aivadwtgip agrmvkdeas qvlelparla qrvtgqdgal aqigeriqta 601 raglgdprkp vgvfmlagps gvgktetala laeaiyggeq nlvtinmsef qeahtvstlk 661 gappgyvgyg eggvlteavr rhpwsvvlld eiekahhdvh elfyqvfdkg gmedgegthv 721 dfknttlllt tnvgsdlisq mcedpalmpd atglkealmp elrkhfpaaf lgrvtvipyl 781 pldetsrgvi arlhldrlva rmseqhgvtl tyseelvahi vaccpmhetg arlligyieq 841 hilprlsryw lqamtekaai rqidigvngd eqivfeivc