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LOCUS NP_459089 629 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_459089 VERSION NP_459089.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 629) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 629) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 629) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 629) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL19048. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..629 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..629 /product="putative sulfatase" /calculated_mol_wt=71616 Region 66..480 /region_name="sulfatase_like" /note="uncharacterized sulfatase subfamily; cd16035" /db_xref="CDD:293759" Site order(74..75,108..109,163,165,256,382..383) /site_type="active" /note="putative active site [active]" /db_xref="CDD:293759" Site order(74..75,109,163,165,256,383) /site_type="other" /note="putative substrate binding site [chemical binding]" /db_xref="CDD:293759" Region <528..598 /region_name="DUF4976" /note="Domain of unknown function (DUF4976); cl20644" /db_xref="CDD:419068" CDS 1..629 /locus_tag="STM0084" /coded_by="NC_003197.2:95959..97848" /note="similar to E. coli putative sulfatase (AAC76701.1); Blastp hit to AAC76701.1 (497 aa), 31% identity in aa 251 - 345, 31% identity in aa 5 - 103, 45% identity in aa 400 - 431" /transl_table=11 /db_xref="GeneID:1251602" CONTIG join(WP_000066317.1:1..629) ORIGIN 1 msnkknlsae etdltrrkll tsagilaagg mlsgavkade kcavkakpaw dkpftgeipe 61 klpegynill vvtdqerffp tfpfpvpgre rlmktgvtfc nhqntsnvct psrsvlytgl 121 hmpqtkmfdn lglpwmpydl dpalgttghm mrelgyytay kgkwhltekl ekplpdekde 181 didvgdipep elhkimekyg fadyhgigdi ighskggyfy dstttaqtin wlrckgqpln 241 dqhkpwflav nlvnphdvmf idtdkegekv qwrgeldqdd ntlaptqppe nelyqaswpn 301 yplpanrhqs fneqgrppah leyqtaraal egqfpdedrr wrklldyyfn cirdcdthld 361 rilneldalk ltdktivvft adhgelggsh qmhgkgasvy keqihvpmii shpaypgnkk 421 cqaltchldi aptlvgltgl peekqhqalg nrkgvnfsgl lknpesvavn avrnaslycy 481 gmilytdahy lhrvialqrd kqktvaqikq eishlhpdfs hrsgtrmind grykfaryfs 541 lrehntpetw edlikyndle lydlkndpde nhnlaadkqk yqdliltmne klnkiikdei 601 gvddgsfmpd aahepwdlti eqfnrmakd