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LOCUS NP_459023 699 aa linear CON 08-SEP-2022 Typhimurium str. LT2]. ACCESSION NP_459023 VERSION NP_459023.1 DBLINK BioProject: PRJNA57799 BioSample: SAMN02604315 DBSOURCE REFSEQ: accession NC_003197.2 KEYWORDS RefSeq. SOURCE Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ORGANISM Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella. REFERENCE 1 (residues 1 to 699) AUTHORS McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneking,T., Nhan,M., Waterston,R. and Wilson,R.K. TITLE Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 JOURNAL Nature 413 (6858), 852-856 (2001) PUBMED 11677609 REFERENCE 2 (residues 1 to 699) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-SEP-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (residues 1 to 699) AUTHORS McClelland,M., Jain,A., Saraogi,P., Mendelson,R., Westerman,R., SanMiguel,P. and Csonka,L. TITLE Direct Submission JOURNAL Submitted (13-JAN-2016) Department of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697, USA REMARK Sequence update by submitter REFERENCE 4 (residues 1 to 699) CONSRTM The Salmonella typhimurium Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2001) Genome Sequencing Center, Department of Genetics, Washington University School of Medicine, 4444 Forest Park Boulevard, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AAL18982. Supported by NIH grant 5U 01 AI43283 Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the programs; GLIMMER; http://www.tigr.org/softlab/glimmer/glimmer.html and GeneMark; http://opal.biology.gatech.edu/GeneMark/ EC numbers were kindly provided by Junko Yabuzaki and the Kyoto Encyclopedia of Genes and Genomes; http://www.genome.ad.jp/kegg/, and Pedro Romero and Peter Karp at EcoCyc; http://ecocyc.PangeaSystems.com/ecocyc/ The analyses of ribosome binding sites and promoter binding sites were kindly provided by Heladia Salgado, Julio Collado-Vides and ReguonDB; http://kinich.cifn.unam.mx:8850/db/regulondb_intro.frameset This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >= 30); an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. Method: conceptual translation. FEATURES Location/Qualifiers source 1..699 /organism="Salmonella enterica subsp. enterica serovar Typhimurium str. LT2" /strain="LT2" /serovar="Typhimurium" /sub_species="enterica" /culture_collection="ATCC:700720" /culture_collection="SGSC:1412" /type_material="type strain of Salmonella enterica" /db_xref="taxon:99287" /focus Protein 1..699 /product="putative exochitinase" /calculated_mol_wt=76468 Region 55..465 /region_name="GH18_chitinase" /note="The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an...; cd06548" /db_xref="CDD:119365" Site order(58,97,229,231,233,303,305..306,356,460) /site_type="active" /db_xref="CDD:119365" Region <513..587 /region_name="myxo_dep_M36" /note="myxosortase-dependent M36 family metallopeptidase; NF038112" /db_xref="CDD:468355" Region 647..695 /region_name="ChiC_BD" /note="Chitin-binding domain of chitinase C; cd12215" /db_xref="CDD:213178" CDS 1..699 /locus_tag="STM0018" /coded_by="NC_003197.2:17867..19966" /transl_table=11 /db_xref="GeneID:1251536" CONTIG join(WP_000235798.1:1..699) ORIGIN 1 matskliqgd titetthaan gfdpatsddk isytsarvak pvynkyknst tkpkvfgyyt 61 dwsqydsrlq gnmsqpgrgy dltkvsptay dklifgfvgi tgfrkidted rdvvaeaaal 121 cgkvkyeptf ldpwgdfqsy inlgfdvsgw dvdpktvtqs nakgllgalr dmqakakaag 181 htlalsmsig gwsmsngfhe taasdssrki fakgvvklfk qfpmfsevdi dweypnnega 241 gnpfgpedga nyalliaelr kqldsaglsn vkisiaasav ttifdyakvk dlmaaglygi 301 nlmtydffgt pwaetlghht nrkaleeggw avetivdhll aegfsadrin igyagytrna 361 rqveieslsp lkgsynpgsg pttgsfesgt sewydviysy ldlenqkgrn gfnvytdqva 421 dadylyspes klflsldtpr tvkakgeyaa klglggvftw tidqdngvlv navreglgye 481 iesevidmep fyfeginvek deeqsdsdda qkvnhapkaa ielmvvggst vqlsgagssd 541 edndelsfsw gvpsqidvad ktaeiievvv pevsektafq ftlfvrdcyn epssqqrfvl 601 tavpalsqvq pepeeeeeii vpvpdeeedt tpaeddtpad dktspyaqwd astvyganwg 661 sfeivswkgh nyqvkwwsmg nqpdlncgvg gawtdlgay