Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS YP_950428 653 aa linear PHG 11-JAN-2023 ACCESSION YP_950428 VERSION YP_950428.1 DBLINK BioProject: PRJNA485481 DBSOURCE REFSEQ: accession NC_008717.1 KEYWORDS RefSeq. SOURCE Pseudomonas phage DMS3 ORGANISM Pseudomonas phage DMS3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Casadabanvirus; Casadabanvirus DMS3. REFERENCE 1 (residues 1 to 653) AUTHORS Zegans,M.E., Wagner,J.C., Cady,K.C., Murphy,D.M., Hammond,J.H. and O'Toole,G.A. TITLE Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa JOURNAL J. Bacteriol. 191 (1), 210-219 (2009) PUBMED 18952788 REFERENCE 2 (residues 1 to 653) AUTHORS Wagner,J.C., Zegans,M.E., Murphy,D.M. and O'Toole,G.A. Jr. TITLE Complete genomic sequence and annotation of Pseudomonas aeruginosa phage DMS3 JOURNAL Unpublished REFERENCE 3 (residues 1 to 653) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-AUG-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 4 (residues 1 to 653) AUTHORS Wagner,J.C., Zegans,M.E., Murphy,D.M. and O'Toole,G.A. Jr. TITLE Direct Submission JOURNAL Submitted (12-MAY-2006) Dept. of Microbiology & Immunology, Dartmouth Medical School, Rm. 505, Vail Building, Hanover, NH 03755, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from ABG66658. Method: conceptual translation. FEATURES Location/Qualifiers source 1..653 /organism="Pseudomonas phage DMS3" /host="Pseudomonas aeruginosa" /db_xref="taxon:2913973" /note="temperate bacteriophage" Protein 1..653 /product="transposase" /name="DMS3-4" /calculated_mol_wt=73478 Region <2..89 /region_name="HTH_MerR-SF" /note="Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily; cl02600" /db_xref="CDD:470628" Region <181..430 /region_name="Tra5" /note="Transposase InsO and inactivated derivatives [Mobilome: prophages, transposons]; COG2801" /db_xref="CDD:442053" Region 443..503 /region_name="Mu-transpos_C" /note="Mu transposase, C-terminal; pfam09299" /db_xref="CDD:430512" CDS 1..653 /locus_tag="DMS3-4" /coded_by="NC_008717.1:2175..4136" /transl_table=11 /db_xref="GeneID:4643099" ORIGIN 1 mgrgggreyh isslpdetra allnaalgev atkvvrqetq lalvetnrqq lvadarqgvl 61 haldlmmart gysrkrsitl mldmarlgqv epqllamlkm ardprgrpsa dglpsvrsle 121 rfldqaerga lvpkvrrpdm svpdwapafm tiyqgpekrs araahallek hwqgqmpsld 181 qvyaflrkvg nvsrevgrmg eheikalrpf irrdftkllp tdvyscdght fdaevqhpmh 241 grpfrpeitt iidirtrrip gwstglaesa lvvvdalrda ctkggipaif yvdngsgyvn 301 hmmrdeavgl mgrlgidmkn slpynsqarg viervhqslw iraakelpgy igadmdrqak 361 latfkltrra iakggtmplm swesfvafce qqiaeyndrp hsslprivdp ntgrrrhmtp 421 neawalheae gfspmrvtdd earplfrpqv lrtvrrcele fignryfare leefhgdqva 481 vgydihdasr vwvydgegrf lctaelngns rdympasyve rarekraear ekralahlde 541 iraerdggya lemdaplsip glgtitpeql rsrsaatlem qaerideprp aaataqatta 601 qvftlptapa qryrqwcela erqrsglpie pdaaqwfevy pkskefaaqq rqa