Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

nickel ABC transporter periplasmic substrate-binding protein


LOCUS       YP_005229305             522 aa            linear   CON 02-JUN-2020
            [Klebsiella pneumoniae subsp. pneumoniae HS11286].
ACCESSION   YP_005229305
VERSION     YP_005229305.1
DBLINK      BioProject: PRJNA84387
            Assembly: GCF_000240185.1
DBSOURCE    REFSEQ: accession NC_016845.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae subsp. pneumoniae HS11286
  ORGANISM  Klebsiella pneumoniae subsp. pneumoniae HS11286
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group;
            Klebsiella; Klebsiella pneumoniae complex.
REFERENCE   1  (residues 1 to 522)
  AUTHORS   Liu,P., Li,P., Jiang,X., Bi,D., Xie,Y., Tai,C., Deng,Z.,
            Rajakumar,K. and Ou,H.Y.
  TITLE     Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae
            HS11286, a multidrug-resistant strain isolated from human sputum
  JOURNAL   J. Bacteriol. 194 (7), 1841-1842 (2012)
   PUBMED   22408243
REFERENCE   2  (residues 1 to 522)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2012) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 522)
  AUTHORS   Ou,H.-Y., Jiang,X., Liu,P. and Li,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2011) State Key Laboratory of Microbial
            Metabolism, Shanghai Jiaotong University, 1954 Huashan Road,
            Shanghai 200030, China
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence is identical to AEW63703.
            RefSeq Category: Reference Genome
                        CLI: Clinical Isolate
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Klebsiella pneumoniae subsp. pneumoniae
                     HS11286"
                     /strain="HS11286"
                     /sub_species="pneumoniae"
                     /db_xref="taxon:1125630"
     Protein         1..522
                     /product="nickel ABC transporter periplasmic
                     substrate-binding protein"
                     /calculated_mol_wt=58074
     Region          19..518
                     /region_name="PBP2_NikA_DppA_OppA_like"
                     /note="The substrate-binding domain of an ABC-type
                     nickel/oligopeptide-like import system contains the type 2
                     periplasmic binding fold; cl01709"
                     /db_xref="CDD:445520"
     Site            order(42,47,117,120,157,418,422,510)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173854"
     CDS             1..522
                     /locus_tag="KPHS_50050"
                     /coded_by="NC_016845.1:5007938..5009506"
                     /transl_table=11
                     /db_xref="GeneID:11850074"
CONTIG      join(WP_002921102.1:1..522)
ORIGIN      
        1 msiirltlla llacvpllaq aapyqlttaw pvnvgplnph lytpnqmfaq smvyeplvky
       61 qadgsvqpwl atrwrhsadg ktwwftlrdd vafsngepfn aqaaaanfra vlanrqrhaw
      121 lelanqitdv ralsatelqi tlksayapll qelalprpfr fiapsqfidg gtargikapi
      181 gtgpwrlass qlnqrdvlvr nerywgrkpa lqqitikvip datsravafe tgeidmlygd
      241 egllpldtfe rfrhhpgyva rlsapaetvm lalnasqgpt reqavrealn yavdkqtlvd
      301 svlygtqqva dtlfapsvpy apqdltprry dptkaralle qagwqqlegq pwrqkagqpl
      361 aielafigtd alaksmaeii qanlrqvgvq vtlvgeeess iyarqregrf gmifnrtwga
      421 pydphaflss mrvpshadyq aqrglpdkal idkeisevlt tgdeaqrrkl yhdvltrlhq
      481 davylpisyv slmsvarqev geipfapvts eipfdqitpv tp