RNA-binding protein Hfq [Klebsiella pneumoniae subsp. pneumoniae

LOCUS       YP_005224716             102 aa            linear   CON 02-JUN-2020
            HS11286].
ACCESSION   YP_005224716
VERSION     YP_005224716.1
DBLINK      BioProject: PRJNA84387
            Assembly: GCF_000240185.1
DBSOURCE    REFSEQ: accession NC_016845.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae subsp. pneumoniae HS11286
  ORGANISM  Klebsiella pneumoniae subsp. pneumoniae HS11286
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group;
            Klebsiella; Klebsiella pneumoniae complex.
REFERENCE   1  (residues 1 to 102)
  AUTHORS   Liu,P., Li,P., Jiang,X., Bi,D., Xie,Y., Tai,C., Deng,Z.,
            Rajakumar,K. and Ou,H.Y.
  TITLE     Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae
            HS11286, a multidrug-resistant strain isolated from human sputum
  JOURNAL   J. Bacteriol. 194 (7), 1841-1842 (2012)
   PUBMED   22408243
REFERENCE   2  (residues 1 to 102)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2012) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 102)
  AUTHORS   Ou,H.-Y., Jiang,X., Liu,P. and Li,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2011) State Key Laboratory of Microbial
            Metabolism, Shanghai Jiaotong University, 1954 Huashan Road,
            Shanghai 200030, China
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence is identical to AEW59114.
            RefSeq Category: Reference Genome
                        CLI: Clinical Isolate
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Klebsiella pneumoniae subsp. pneumoniae
                     HS11286"
                     /strain="HS11286"
                     /sub_species="pneumoniae"
                     /db_xref="taxon:1125630"
     Protein         1..102
                     /product="RNA-binding protein Hfq"
                     /calculated_mol_wt=10872
     Region          1..76
                     /region_name="hfq"
                     /note="RNA-binding protein Hfq; Provisional; PRK00395"
                     /db_xref="CDD:179001"
     Site            order(6..8,11,26..30,38..40,42..43,50..64)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212463"
     Site            order(22..28,30..47)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212463"
     Site            order(25,29..33,46,52,60..61,63)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212463"
     Site            51..62
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212463"
     CDS             1..102
                     /locus_tag="KPHS_04160"
                     /coded_by="NC_016845.1:454650..454958"
                     /transl_table=11
                     /db_xref="GeneID:11845403"
CONTIG      join(WP_002885659.1:1..102)
ORIGIN      
        1 makgqslqdp flnalrrerv pvsiylvngi klqgqiesfd qfvillkntv sqmvykhais
       61 tvvpsrpvsh hsnnagggss nyhhggsaqg ssapqqdsdd ae