Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419848             870 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913954), ncRNA.
ACCESSION   XR_011419848
VERSION     XR_011419848.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..870
                     /gene="LOC138913954"
                     /note="uncharacterized LOC138913954; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913954"
     ncRNA           1..870
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913954"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:138913954"
ORIGIN      
        1 cagactgagg aaatcatacg attgcagctg gccgatacgt cacccggcga catctaacat
       61 ctaatatcta gcgtctatat agaaccccga tttgcattga attcagtggc ggtgatgaaa
      121 tcagaccaga gatgaccagc gcaaaaaggt cgcgagggca agtgatttgt catgggcatt
      181 aatataaaaa aaacgataga ccctcaaagt tttcccaccg ccaggcggaa gaatcgctcg
      241 atttgcaatc aatgcaatcg attaggtcaa aggcgacctt cgcccaaagt cagaacaact
      301 cagacttttc cttccagctt tttatttctt gttcatttat tggccataac taactattcc
      361 gattctaagt agttaatcca taatttaaat tgctatttgg ttgcgccttt tgccttttgc
      421 ttttgctatt gctattgctt ttgctccgac ggccttcaac ttgaaattga aaattggcca
      481 attaataacg caaattatgg cggtcaaccg cagttgttgt gggtaggtgc tatatatttt
      541 tttgggttcg gtggggaggg gtttaaatca tatcgtattg gatcggaatg gatagtagtg
      601 acaagagtaa cagttttgcc tgcaattatc gcttcgctcg gaagtgacta attcccctct
      661 caattcatta gtaatacgtt tttcggcact tttgcggcag atggaaatgg atcaattaat
      721 ggactgccgg ctgccgtgtc aaattacttt caaatttaat gaaaaattct tgcaaaatta
      781 ttggaacaac aggaagctgc aattaacgca aattaactgc gggaaaatga gaaccaatcg
      841 aaaatagaga aaaaaaaaaa gcgcgcaaaa