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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419827            1171 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913936), transcript variant X6, ncRNA.
ACCESSION   XR_011419827
VERSION     XR_011419827.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1171
                     /gene="LOC138913936"
                     /note="uncharacterized LOC138913936; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913936"
     ncRNA           1..1171
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913936"
                     /product="uncharacterized lncRNA, transcript variant X6"
                     /db_xref="GeneID:138913936"
ORIGIN      
        1 caaggacacg ggccaaaggg atggaaactg gggccaggga tcaggacaaa aacagtgaca
       61 aacaggactg tgaaccattt cggagcggta tacggaaaga aagatttaag atgaacaacc
      121 aaattacctt ttatttggga cctaaggttt aagagggata atattttacc gaaggaatga
      181 tcaaattttt tgtgaaatga acacaggaga ctgcatggac tttgatttga tggatctgaa
      241 taggatgctt gctctaaata tctctaaatc ttcattataa agctcgtgga catatgtaaa
      301 tatgagtgca gcagagcaat cataacaaaa atgctgcaca ctcaaattat ccctaaataa
      361 tttagatctg tgcgggcgaa cgaaatggca gaaggagaaa gatgaggagg agtatgtaac
      421 atgaaagcgg aagcggaagt gcttacctct acgcacatgc ccatgggact ttatggaggc
      481 tgaaatctag cactgagata aactaaattt tcgcctacga attgcccttt ctacctacat
      541 tataatcgtt cttaagccca ttggtcttgg gacataactc ttttcgtggc tcccctgacc
      601 gaccgcttca gacagttgga attacgagca tttccggttg cttcggcaaa taattaagac
      661 tccgttttag agcggttcca ggagctacca tattttatcc gtggcgattt cgtgccggca
      721 catcaatcaa agtaaatatg tgagtgcggg ggcgaaggcg gcaatttcca tgcgaatgtg
      781 tttcaagtgc ctttcccagt tataaatttc cgcacacatc ccagcacaag gacgaaggac
      841 acgaacgggg aactgggaac aggcgctgaa tgcattccac tcacggcaat ggggaaagtg
      901 tcaagttaat gccagcagcg atagcaacaa caacaacaac aacagcagca acgacgacta
      961 caaggacatt gcccacccac atattccgcc cacctccttt tgcgacaacc ccttcaccta
     1021 atgactgcgt tgacggcgtc atttgcctgg cgaaaagaac catcgactga gcctcgtgca
     1081 tgatctcctc gagggtcatc tccccgttgg cggccagctg gaagatctgt tcgatgaaga
     1141 tgcgcctctg ccagccggcg gaagaatcct c