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LOCUS XR_011419789 3414 bp RNA linear INV 09-DEC-2024 transcript variant X4, misc_RNA. ACCESSION XR_011419789 VERSION XR_011419789.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3414 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3414 /gene="br" /note="broad-complex core protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108063837" misc_RNA 1..3414 /gene="br" /product="broad-complex core protein, transcript variant X4" /db_xref="GeneID:108063837" ORIGIN 1 aggtctagtt gaagccggat cgccggaaac ggaaccggaa ccggaggcga tgcacctgaa 61 acagccggag gatccctcgc aaacagacat ttaaataatc attagtgaat caagtcttca 121 gctacctaag gaatcggcaa ataatcaaga aaagtaaccg aagaagagag tcaagtaagg 181 aataccatcc ttccttccaa aaccggtggg ccaggccgcc aaaaagccgt caaaatacgc 241 aagaaggtga cctcgaagaa ggccagcgtt gtgtcggttg acgacgatca caacaacaac 301 aacaccagcc acaacaacga ccacaacgct cggcagccca caagcacaat tacaccaata 361 tcaacaactc caacacccat accaacgccc ataccaacac caacgcccac gcctggtgac 421 cccgaacaac aggatagcgt agagtaccag taccagtacc agtacccccc cactaccaat 481 cagaaacagc ccatcgaaat ggacgacaca cagcacttct gcctacgctg gaacaactac 541 cagagcagca taacctcggc cttcgagaat ctgcgggacg acgaggcctt cgtggacgta 601 accctcgcct gcgaggggcg cagcatcaag gcccaccgcg tcgtcctctc cgcctgcagt 661 ccctacttcc gcgagctgct caagagcaca ccctgcaaac acccggtcat actgctgcag 721 gatgtcaact tcatggacct gcactcgctg gtggagttca tctaccacgg cgaggtcaac 781 gtgcaccaaa agtccctgca gtccttcctc aagaccgccg aggtgctgcg cgtctcggga 841 ttaacgcaac agcaggcgga ggacacacat agccacctgg ctcagataca gaacttggcc 901 aactccggtg gccgcacgcc catcaactcg cactcccatc cacatccgca tcatggctcg 961 ctgcacgacg acggcggctc cgcctcgacc ttgttcagcc gccagggagc cggctcgccg 1021 ccgccgccgc aatcggtggt gccgtcggtc ctcccgccgc acatcaacaa ccagctgctc 1081 aagcgcatgg ccatgatgca tcgcagcagt gccgccgccg tcgccgagga gacctcgcac 1141 gccctgaagc gcctgcgcgg atcggacaac aacggaggac tgccgctctc cggcgccgtc 1201 ggcagtggcg gtagcaacaa caacagcccc gacttgccgc cgctccatgc gcgcagcact 1261 tcgccccagc agactccggc cgactttagt acgatcaagc accacaacaa caacaacacg 1321 ccgccgctca aggaggagaa gcgtaatgga cccactggca acggaaactc tggcaatggc 1381 aatggcaacg gagcgagcaa cggcaacgga atctccatca gcgacaagct gggcagcctc 1441 acaccatcgc cactcgcacg ggcgggcgcc gatgacgtca agtcggagcc catggagctc 1501 gtgtgctcca acaacaatgc gaatgccaat gacgagcaca gcaacgactc caccggcgag 1561 cacgatgcca atcgttccag tagtggcgac ggcggcaagg gttctttgag ctctggcaac 1621 gacgaggaga tcggtgacgg actcgcctct catcacgccg ccccgcagtt catcatgtcg 1681 ccggcggaga acaagatgtt tcatgccgcc gccttcaact tccccatgag caatctcgat 1741 cactcagcgt tgcttggtct caacacacaa ttgcagcagt ccggtgacct cgccgtttcc 1801 cctcaaggaa actcgcccaa gaaactcttc tcatgccagc tctgcggtaa gctgctctgc 1861 tcgaaagcct cgctcaagcg ccacattgcc gacaagcacg ccgtacgcca agaggagtac 1921 cgatgcgcca tctgcgagcg ggtctactgc tcgaggaact cgctaatgac gcacatttat 1981 acctaccaca agtcccgtcc cggcgaaatg gagatgaagg acattaagct ctataaccag 2041 ttcaactcgt cgatctgaga cataacgccc ttgccgggtc tacagcaaca gcaaaagcaa 2101 aagaaagcca gcacaaccat gaccatgatg aataccaata caaacccaac tccgacattg 2161 acttctacta cctcaactcc aatgacagat cacacggata tctatccgaa gcgacctctg 2221 ctaaacgatc agtaccaact gctaatacag caacgacaga taatgactct gtatgactac 2281 tacctctatc agcgaaacag tcacggtctc agtcacagtc aaagtcacag tcacagcagc 2341 agtcacggcc cttcgattgc caccacgagc aactagacat cggactagaa cttagctcaa 2401 acttaaagca atgccattat gtagtgatat atatatacct accaatctat tatacacgac 2461 gaacaaagag agtaggagaa gattacgaac aatatatatt aatattatat gcctaactat 2521 taacaaaaga cattagacgt aggtaagcta gttttagatc atagttagat tagccagatc 2581 aacctgtaca tcgatgtcga cctaacgtag tagacttgct gactttttca caacctcaaa 2641 cgcctatgga ccagtatata aagattacgg atatacacta tatttacact ctgtggcctt 2701 cttttacctt atacctcata caacgtactc gtagtcaatt ttacaattat agctcttttt 2761 cgtgtttctg ttagttcgaa aacggacgga cctcgcacaa gttgcctttc tcaatatcta 2821 cgtaatttcc cactcgacct agacaagctg aacagattga acagattgta acgagctttc 2881 ttccgtaaca taaatatact tataaaaagc aaaatacata tatatataca ttcatagcta 2941 tatatatata taacataact cgaagacgaa taattaatag tggaaaataa agcacaactt 3001 aggcataagt cccccagttc gccgatcaac ttgtgcctag tgctataaat gctgcaacaa 3061 tacaaaacgg ctcggcttgg ctcaacgaga acaacaacaa gaacaactac cagaacacat 3121 tttgtcgagc ggagaatgaa agagacccag aatcctgaat cctgaaatcg gagggatgtg 3181 agctggctcc acttgaccat gatgtaatga tgatgtacca gtgtaccaga ggcgcaactt 3241 taactttact cgctaccagc gtctcgctac tcgcacccgc tactcgttag tcagtcaaag 3301 tagaagatcg cgcgcttgct aaaggaccgc acagcatcag ccgatccgca gctacctcgc 3361 ccacctcgtc tacctcatcg ccgccctcgc cgcccactgc gctgacctcg ccca