Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419768             627 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913896), transcript variant X2, ncRNA.
ACCESSION   XR_011419768
VERSION     XR_011419768.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..627
                     /gene="LOC138913896"
                     /note="uncharacterized LOC138913896; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913896"
     ncRNA           1..627
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913896"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:138913896"
ORIGIN      
        1 cggtgtttcc gtacggacag cagctctaga atgactgaaa ctcacattct agccttcaag
       61 taaactttta caagtgacag atcgagatca aaggttcctt gataactaaa attaaaacaa
      121 taggtgtttt tatttgttat cgatacctat cgatagttgt gggcttacta tagatacaca
      181 aaacagatat attttgtaca caaagtttgt caattatttt cacaacagcc tacaaattta
      241 tggcatgttc aagactatcg attgcgagta ttctcgccac tgcccggcac ggtcatactg
      301 agaaaacagt gaaaaaagga gtgtgtgata gctgcggact ttgccacaca caccaactca
      361 ctgtttgcac tcggatagca aagcaagagg cggcaataga cgaccttgtg ggtcctctac
      421 actggcactt tattaaagtt gtacacttgt catcgcctgc cgaattaagt acacatttgt
      481 cgcgctaaaa atacagtgtt ccgaggggag ttcacccctc acttaggact atgtttgggg
      541 ggtcatacca cccccaaagt aataattcca taatagtagt taataaaaaa aaacacacac
      601 acacgctctc tggactctaa gctaaac