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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419766            1662 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913895), ncRNA.
ACCESSION   XR_011419766
VERSION     XR_011419766.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1662
                     /gene="LOC138913895"
                     /note="uncharacterized LOC138913895; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913895"
     ncRNA           1..1662
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913895"
                     /product="uncharacterized lncRNA"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:138913895"
ORIGIN      
        1 tcgaactcac gcgcacgctc taaattagtc attaaacaaa accaaggaat gcaacaacaa
       61 gcgagcactt tcaagaatat ctacgaataa ataagtgaag aggagagcgc caaggagaaa
      121 aagaaatgcg catttaactg cggcgaactc aattcgccgc aagctgcagt ggtgtgcgtg
      181 tggcggttgc ccaagtgtca gtgtattagt gtcgtagggc gatcgatatt ttcgctgttg
      241 ttgttgcttt tgcagagaaa aaaaaatctg acggtgttgc gatctcggca acgcaattaa
      301 aaacagggca aacagaagat cgtacataca tacatgcata tgtatttcac aaatccccta
      361 cctgaacggc ggtttgaaac gaagtttgga gcacaacaac aacaaccgag tgcacaatat
      421 acacttaaac atgtgtgctc acagctggtc ttcgtcttcc caacaagtct gcttgaagta
      481 catggaaaac tagcgaaatc aaataacaaa cgaacggacg gcgcaaagaa aatacgtagt
      541 tccgttgata cgacgtacaa acctcaggcg acccctggtg ctgatctacc agtccgagta
      601 atccgggaat tccagatcga cgtggcagtc cagatctcaa atatagatta tctatatgta
      661 cgatcggaag ttgcgaaaga attgaaatcc cgattcctac tgagcacatc cgagccaaaa
      721 ctgctgataa taccaaaatt ttattcgacg cttgagtttc ggaggtttta ccctctaaac
      781 aatcactcac tcaatagcaa tcgtatttag cttgcttaat tctactgtat tgcgaaatac
      841 atacgtcttt ttaaatccgc cttcttgcct gactaaaaga tctgagaata ccgaatacat
      901 aaaagacgaa ccgtgtgtat acagcgaaat tccgaactag tatacacaca caaaatcaag
      961 acggccaaag atgttgaaat gatcgaacaa aatgaaagga aaggagggtg cagtttcttt
     1021 tcaaaggggt tgttacggat gaagaaacgc aactcgcaac ttgtacaacg gaaatcggga
     1081 accttctaga aatctataat cgaccagtaa tgaagtggtt aacaggtcaa gatagcgcaa
     1141 taaggaattt ttcatcagcg tcaacagcaa tgtcaattgc tacgcaaact attatctcag
     1201 ttcctattga atatcaactt ttttaaatcc ttcttattcc agtatacaca ttggatgaac
     1261 gaaaggacac gttatgaagg acgccaatga agtaatgaat gaaaaagaat tggaattatg
     1321 gatataaaaa ggtattgttt tcaccaatcg aaataattta atttagtaca cattggataa
     1381 acgaaaggac acgttatgaa ggatgccaat caagtaatga atgaaaaaga attagaattg
     1441 gtattgtttt caccaatgga accaatttaa aaggaaatta ttataataca aataaatact
     1501 gccataatgt taaaggatgc cattaaacat aaataataaa tgaacgaata attcgatatt
     1561 tttggatatt aaaaggtacg atataacgat atagaaattg aaaatttata ctttaagtta
     1621 aaaaagagct ttgtattttt aaaaaataaa taaataaaat ga